| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1939 |
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| Symbol | |
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| ID | 4038744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2107731 |
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| End bp | 2108669 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977322 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_584087 |
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| Protein GI | 94310877 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000010986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.809393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCA AAGTCAATGA AGCGCGTGGC ACACTCATGC TTATGACGCC CTCCCTGAAG
CAGTTGCGCT ATTTCGTCGA GATTGTGGAC GCAGGCAATT TCAGCCTGGC GGCCGAACGG
CTGTTCATCG CCCAATCGGC GCTGAGCCGG CAGATACGTG ACATGGAAGC GACGCTGCAG
GTGGAACTGC TGGTGCGCAA GCCTCGGCAC GTGGAGCCGA CGGCGGCGGG GCAGGCATTC
TACGAATCGG CGCGCCGCAT TCTGTCCGAC CTCGCCGGCG CAGCCGTGCA GGCCCGCCAA
GTGCAGCGCG GTGGGGCCGA TGCGATACGC CTGCTCCATT CGAGTTCGGT CGTGCTGACG
CCGCAGCGTT GCGGCTGGTT GCATCGCTGG CAGTCCGACC ATCCCGCCGC CCGCTTTGAA
GTTGCCCAGG CATCGTCGGA GCAGCAATCG GTCGACATCG AGGAGGGCCG TGCCGACCTC
GGGTTGGCGC GTGATCCGGT ACTGCGCCGC TACCCGAACA TCCAGATCGA TCCGATGGCC
GGGGAGCGGC TGGTCGTGGC TGTCTGCGCC GATCATCCGA TGTCGCGACG GGAATCGCTG
ACGCTGAGTG CCTTGCGAGA GATGCCGTTT GTCTCGCTGC CGCACCCGGA GCGGGGCGGG
CTCAGCTACC GCGTGGCGCA GCTTTGCCAG GCGAGCGGCT TCTATCCAAC GGCGGCCGGT
GCGATTTCGC GCAAGCTTTC GCAGCTATCT CTTGTGGCGG CGGGCTTTGG CGTAGCCGTG
GTGCCGGAAT CGATGCAGTG GTTCGGGCCC GATGGCGTCC GGTTGGTGCC ACTGTCCGAT
GCGGGCGCGA CGACACGTGT GGTACTGCTC TCCCGCCGAG ATGCGCCCGA GCCGGTGGCG
GCGCTCCGTA CGCTGGCGCT GTCCGCCGGC GCCGCCTGA
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| Protein sequence | MAAKVNEARG TLMLMTPSLK QLRYFVEIVD AGNFSLAAER LFIAQSALSR QIRDMEATLQ
VELLVRKPRH VEPTAAGQAF YESARRILSD LAGAAVQARQ VQRGGADAIR LLHSSSVVLT
PQRCGWLHRW QSDHPAARFE VAQASSEQQS VDIEEGRADL GLARDPVLRR YPNIQIDPMA
GERLVVAVCA DHPMSRRESL TLSALREMPF VSLPHPERGG LSYRVAQLCQ ASGFYPTAAG
AISRKLSQLS LVAAGFGVAV VPESMQWFGP DGVRLVPLSD AGATTRVVLL SRRDAPEPVA
ALRTLALSAG AA
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