| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02614 |
|---|
| Symbol | |
|---|
| ID | 6307860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 4465602 |
|---|
| End bp | 4466492 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642641591 |
|---|
| Product | transcriptional regulator LysR family |
|---|
| Protein accession | YP_001915429 |
|---|
| Protein GI | 188578500 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATGG ACCTGGCCAG CCTCAATGCA TTCGTGGCGG TCGCCGCAAG CGGCAGCTTC
TCTGCGGCTG GTGAGGCCCT GCATCTGACC CAACCGGCAG TGAGCAAACG CATCGCGCTG
CTGGAGGCGC AATTGTCGGC GCGGCTGTTC GACCGCCTGG GCCGGCAAGT GGTGCTGACC
GAAGCCGGCC AGGCGCTGTT GCCGCGCGCG CAACGCATTC TGGCCGAGCT GCAGGACACC
CGCCGTGTGC TTGAGCATCT AGGCGCGGCG TTTGGCGGTC GTTTGAGTCT GGCCACCAGC
CACCATGTGG GTCTGCACCG CCTGCCGGCC TTGTTGCGCA GTTTCGCCAC ACAACATCCG
CAGGCGGCGC TGGACATCCA GTTTCTGGAT TCGGAACTGG CCTATGCAGC GGTGCTGCGC
GGCGAGCTGG AACTGGCAGT GACCACACTG GCGCCCGAAA CGCACGCACC ACTGCGCGCG
CAGCCGATCT GGCACGACCG CCTGCACTGC GTGGTTGCGC CAGATCACCC ATTGGCAGCA
CGGCCTGCCG TGTCGCTGGA CGATGTGGTG GCGCACCCGG CGGTGTTGCC CGATCCGGGT
ACCTTCACCC ATCGCATCGT CGCCAACCTG TTCGCCGAAC GCGGCCTGGC ACCGAGTTTG
CGCATGACCA CCAACTACCT GGAAACGATC AAGATGCTGG TGTCGGTGGG CCTGGCGTGG
AGCGTGTTGC CGGAGCGCAT GATCGACCAT CAGATCGTGG CGCTGCCGCT AGCCGATGTA
GCGTTATCGC GCGAGCTGGG TTGCGTCACG CATGGCGGGC GCACCTTGTC GCGCGCTGCA
CGGGCGTTTG TTGCGTTGTT GCATGCGCAG GCGGATCAGG CGCAGGCGTA G
|
|---|
| Protein sequence | MAMDLASLNA FVAVAASGSF SAAGEALHLT QPAVSKRIAL LEAQLSARLF DRLGRQVVLT
EAGQALLPRA QRILAELQDT RRVLEHLGAA FGGRLSLATS HHVGLHRLPA LLRSFATQHP
QAALDIQFLD SELAYAAVLR GELELAVTTL APETHAPLRA QPIWHDRLHC VVAPDHPLAA
RPAVSLDDVV AHPAVLPDPG TFTHRIVANL FAERGLAPSL RMTTNYLETI KMLVSVGLAW
SVLPERMIDH QIVALPLADV ALSRELGCVT HGGRTLSRAA RAFVALLHAQ ADQAQA
|
|---|
| |