| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4940 |
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| Symbol | |
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| ID | 8329138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5893330 |
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| End bp | 5894262 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644945380 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003102612 |
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| Protein GI | 256378952 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000953992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGTTC TGGTGGAGGC ACGGCACCTG AGGTACGCGC TGGCGCTGGC CGAGCAGCAG
CACTTCGGCC GCGCGGCGCG GGTTCTCGGC ATGGCGCAGC CGCCGCTGTC GCGCCAGATC
GCCTTGCTGG AGAAGGAGGT CGGCGCGCGC CTGTTCGACC GGACGGCGCG CGGGGTGTTC
CCGACGGCGG CGGGCGAGGC GTTCCTGGCG CGGGCCCGGC GGGCGCTGGC GGAGCTGGGG
GCGGCGGCGG TGGACGCGGG GCGGGCGGAC CGGGGCGAGA CAGGGCGGTT GCGGCTGGGG
TTCGTGGCGT CGGCGCTGCT GGAGCCGCTG CCGGGGGTGC TGGGGCCGTT CGGGCGGCGG
CACGCGGACG TGCGGTTGGA GCTGCGGGAG ACGGCGAGCG CGCAGGGCGT GGCCGAGCTG
GTCGCCGGAG AGCTGGACGT GGTGTTCGGG CTGGGGCGGC CGAGGGGGCG CGGGGTCGGG
GACCTGGTGT CGGTGGTGGT GGGGCGGGAC GCGCTGGTGG CCGTGGTGGG GGCGGGGCAC
CCGTGGGCGG GGGTGGCGTC GGTGGGGCTG GAGCAGTTGC GGCGTCAGCG GTTGATCGTG
TCGCCGGGGT CGGAGGAGCC CGCGGTGGGC GCGTGGTTGC GCGGGCTGCT CGGCGAGGAG
GCGCTGGCGG GGGCGGTCCA GGCGCGGGAC GTGCACACGA TCATCGGCAT GGCGGCGTGC
GGCATCGGTG TGGGGCTGGG TCCGGAGCGG ATGCGGGTGG CGGAGCGGGC GGGGGTGTGG
TTCTGCGCGG TGGAGCCGGT GGTGGAGCTG CCGGAGCTGG TGCTGTCGTT CCGGGCCGGG
GACGACTCGC CGGTGCTGGC GGCGTTCCTG GCGGTGGTGC GCGAGCGCTG CCCCGGCGTG
GCGGCCCGGT TGGCGGAGGT GGGGGCCCGG TGA
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| Protein sequence | MGVLVEARHL RYALALAEQQ HFGRAARVLG MAQPPLSRQI ALLEKEVGAR LFDRTARGVF
PTAAGEAFLA RARRALAELG AAAVDAGRAD RGETGRLRLG FVASALLEPL PGVLGPFGRR
HADVRLELRE TASAQGVAEL VAGELDVVFG LGRPRGRGVG DLVSVVVGRD ALVAVVGAGH
PWAGVASVGL EQLRRQRLIV SPGSEEPAVG AWLRGLLGEE ALAGAVQARD VHTIIGMAAC
GIGVGLGPER MRVAERAGVW FCAVEPVVEL PELVLSFRAG DDSPVLAAFL AVVRERCPGV
AARLAEVGAR
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