Gene SeSA_A0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0848 
Symbol 
ID6515460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp821119 
End bp822045 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content57% 
IMG OID642745982 
ProductLysR-family transcriptional regulator 
Protein accessionYP_002113798 
Protein GI194737445 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00362304 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTC GCCAGTTACG CTATTTCGTG CGTATTATTG AAACCGGCAG TATGGGCAGC 
GCCGCGCAGG ATCTTGATAT TGGCGTTTCA GCATTAAGTC AACAGATGTC CCGTCTGGAA 
AACGAGCTCG CCATCCGTCT GTTGCAGCGC ACCTCGCGCG GCGTAACGCC AACCAACGCC 
GGGCTGGCCT TTTATTCGCA GGCGCAACTC GCCCTGCGTC ATGCCGACGA TGCGATTCTC 
GCCGCCAGAG AAGCGCGCCT TTCCGGTCAT GTGAGCGTAG GAATGGCCCC CAGTACCGCC 
TCCATACTGG GTATACCGTT TATCCATGCC ATGCAGGAAA ACTATGCCGA TGTCCGACTG 
CATGTGGTGG AAAGCTTGTC CGGTAATCTG GAAAGAATGA TCAATACCCG CCAGATTGAT 
TTAGCCGTTG TCTTTCAAAA AGATAAAATC CTGCGCTGGA GCGCCAGACC GATCCTTGAA 
GAACAGCTTT TTCTGATTGG CTCCCATGCC CTGCTCGCGG TGCTTCCTGA TAACCCGCTC 
ACACCTGAAC AACTGGCAGG CATTCCGCTC ATTATGCCAA GCCAGGGACA CGGGCTGCGC 
GGCAGGCTGG ACGCTGTCTG CCAGGAACAT GCGCTTAACG TTGAAATCGT CGCGGAAATT 
GACGGCCTGG CGTTGTTGAT GCGCGCCGTG CGCGACGGTC TTGGCGCCAC GTTGCAGCCC 
GGCGCGGCGA TTTCTCATCT GGATAACGAC GCGCTACGCG TGATCGGCGT CCATAATCCG 
GTACTCAGCC GCCCCAATTT TTTAGTCAGC CTGTCGGATG ATGAACTGAC GCCCGCCGGC 
CTTGCCGCCA GAGTAGTCCT TACCAAAGTT ATGCGTCAGT TAGTCGACGC CGGTGAATGG 
CCAGGCGCAA CCCTTTACGC TTACTAA
 
Protein sequence
MELRQLRYFV RIIETGSMGS AAQDLDIGVS ALSQQMSRLE NELAIRLLQR TSRGVTPTNA 
GLAFYSQAQL ALRHADDAIL AAREARLSGH VSVGMAPSTA SILGIPFIHA MQENYADVRL 
HVVESLSGNL ERMINTRQID LAVVFQKDKI LRWSARPILE EQLFLIGSHA LLAVLPDNPL 
TPEQLAGIPL IMPSQGHGLR GRLDAVCQEH ALNVEIVAEI DGLALLMRAV RDGLGATLQP 
GAAISHLDND ALRVIGVHNP VLSRPNFLVS LSDDELTPAG LAARVVLTKV MRQLVDAGEW 
PGATLYAY