Gene SeD_A2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2625 
Symbol 
ID6874640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2507688 
End bp2508566 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content48% 
IMG OID642785693 
Productputative transcriptional regulator 
Protein accessionYP_002216350 
Protein GI198245748 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.351429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTAA CCCAAATCCA CGCCCTGCTT GCCGTACTGG AGTACGGCGG ATTTACCGAA 
GCCAGCAAAC GGCTATACAT GACGCAATCC GCCGTCAGCC AGGCCATCTC CGCGCTTGAG 
GAGGAGCTCG GCGTTGACAT ATTGATTCGT GAGCGTCGTA AAGAGATTGA GCTTACCGCC 
GCCGGTAGCC GCATCGTCAG GCACTTACGC GCGATCCAGC GCGACGTCAA CGCGGTAAAA 
GAGATTGCCG AACAAGAAAA AAAGAACCCG GCCCGTACGC TACGGATTGG CTGTTTTCCC 
AGCGCCTGCG CCTGCATTTT ACCCGGCGTC ATTCGCTATT TTGAAAGCCA TCATCCAAAT 
GTAAAAATTA TCCCCTATGA AGAGAACAGT ACGGCTATTA TTGATTCGCT GCAGGACGGA 
AGTATTGATG CCGGTTTCGT TCCTTTTCCG GTCAACGGCA TGTATTGCGT CCCCATTTAC 
CGGGATAAAT TCACCGTAGT GGTGCCTGAA AATCATCCCC TGGCGGCCAA TAGTACAGTC 
ACGGTCGAAG AACTGATGGA CGAACCACTT ATTGTCAGTA AAGGTCGTTA TGAATTAAGC 
ATTATGGCGT TGTTTAAAGA AAAGGGTATT GAGCCGATAT TTAAATATGA ATTTAACCAT 
CCCGATACTG CGCTGAATTT TATTCGCCAG GGATTAGGTA TCGCCTTATT GCCAGAATTA 
ACCTTAAAAG CCACGACAGG AAAATTATGC TCCGTGGCGC TGGAACCCAC CTTTTATCGA 
CAAATTTCCC TGTTAGCAAA AGAACCGCCG GTAGAAGGAA GCCCGCTATT TTTATTACAA 
AAATGTATGG AAACACTGAC CGATGAGGGT TTGCTATAA
 
Protein sequence
MTLTQIHALL AVLEYGGFTE ASKRLYMTQS AVSQAISALE EELGVDILIR ERRKEIELTA 
AGSRIVRHLR AIQRDVNAVK EIAEQEKKNP ARTLRIGCFP SACACILPGV IRYFESHHPN 
VKIIPYEENS TAIIDSLQDG SIDAGFVPFP VNGMYCVPIY RDKFTVVVPE NHPLAANSTV 
TVEELMDEPL IVSKGRYELS IMALFKEKGI EPIFKYEFNH PDTALNFIRQ GLGIALLPEL 
TLKATTGKLC SVALEPTFYR QISLLAKEPP VEGSPLFLLQ KCMETLTDEG LL