| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0751 |
|---|
| Symbol | |
|---|
| ID | 6484809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 759965 |
|---|
| End bp | 760891 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642736163 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_002039929 |
|---|
| Protein GI | 194446525 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000639538 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 0.380791 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTTC GCCAGTTACG CTATTTCGTG CGTATTATTG AAACCGGCAG TATGGGCAGC
GCCGCACAGG ATCTTGATAT TGGCGTTTCA GCATTAAGTC AACAGATGTC CCGTCTGGAA
AACGAGCTTG CTATCCGTCT GCTGCAGCGC ACCTCGCGCG GCGTAACGCC AACCAACGCC
GGGCTGGCCT TTTATTCACA GGCGCAACTC GCCCTGCGTC ATGCCGACGA CGCGATTCTC
GCCGCCAGAG AAGCGCGCCT TTCCGGTCAT GTGAGCGTAG GAATGGCCCC CAGTACCGCC
TCCATACTGG GTATACCGTT TATCCATGCC ATGCAGGAAA ACTATGCCGA TGTCCGACTG
CATGTGGTGG AAAGCTTGTC CGGTAATCTG GAAAGAATGA TCAATACCCG CCAGATTGAT
TTAGCCGTTG TCTTTCAAAA AGATAAAATC CTGCGCTGGA GCGCCAGACC GATCCTTGAA
GAACAGCTTT TTCTGATTGG CTCCCATGCC CTGCTGGCGG CGCTTCCTGA TAACCCGATC
ACACCTGAAC AACTGGCAGG CATTCCGCTC ATTATGCCAA GCCAGGGACA CGGGCTGCGC
GGCAGGCTGG ACGCTGTCTG CCAGGAACAT GCGCTTAACG TTGAAATCGT CGCGGAAATT
GACGGCCTGG CGTTGTTGAT GCGCGCCGTG CGCGACGGTC TTGGCGCCAC GTTGCAGCCC
GGCGCGGCGA TTTCTCATCT GGATAACGAC GCGCTACGCG TGATCGGCGT CCATAATCCG
GTACTCAGCC GCCCCAATTT TTTAGTCAGC CTGTCGGATG ATGAACTGAC GCCCGCCGGC
CTTGCCGCCA GAGTAGTCCT TACCAAAGTT ATGCGTCAGT TAGTCGACGC CGGTGAATGG
CCAGGCGCAA CCCTTTACGC TTACTAA
|
|---|
| Protein sequence | MELRQLRYFV RIIETGSMGS AAQDLDIGVS ALSQQMSRLE NELAIRLLQR TSRGVTPTNA
GLAFYSQAQL ALRHADDAIL AAREARLSGH VSVGMAPSTA SILGIPFIHA MQENYADVRL
HVVESLSGNL ERMINTRQID LAVVFQKDKI LRWSARPILE EQLFLIGSHA LLAALPDNPI
TPEQLAGIPL IMPSQGHGLR GRLDAVCQEH ALNVEIVAEI DGLALLMRAV RDGLGATLQP
GAAISHLDND ALRVIGVHNP VLSRPNFLVS LSDDELTPAG LAARVVLTKV MRQLVDAGEW
PGATLYAY
|
|---|
| |