Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4616 |
Symbol | |
ID | 4690834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 5109066 |
End bp | 5109965 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639852361 |
Product | LysR family transcriptional regulator |
Protein accession | YP_999332 |
Protein GI | 121611525 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.194737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA CTCTCAAGCA GCTTCGCGTC TTCTGCGCTC TGTACGAACT GCGCAGCTTC ACGGCTGCGG CACGCGCTGC GTTCGTCACG CAGTCGGCTG TCAGCAAGTT GTGTGCGGAG CTTGAGAGCG AGGTCGGACA ACCACTGTTC GAGCGCTCGA CGCGCAGCGT CACGCCCTGC GAGGGGGCTG CTGATTTCTA TACCTACGCG CAACAGATTC TGAGCACAGT GCGCGCCGCA GAACGCAGCA TGTCCAGCCT GCGTTCCCTG GAACGTGGCA TCGTGGGTGT GGCGGCTTCG CCCATGGTGA TGTATGGCCT TTTAGGTGAT CCACTGGCCA GCTACCACCG CAACTACCCT GGCATCAAGC TCGACCTCTA TGAGCTGTCC ACGGACGAGA CCATCACCTA CGTTCGCCAT GGCAAGGTGG ACATGGGCAT CGTCTCACTT GAGGTGAAGG ATGCAGAATT GGCAACGCGG CCCATCTTTC GGGACTTTAT GTATGCCGTT TGCACATCTG ACCATCCTCT CGCGCAAGAG GAAAAGGTGT CTTGGTCCGA GCTCGCCAAG TACGACCACA TTGGGCTGCA CAGTGCTTAT AACGTGCGCC GCAGCATCGA TCGAATCTGC GAACAGCTCC ATCTCGACAT TCACTTCAAG ATTGAAGCAA GCATGGTGAC ATCGGTGCTG GGAATGGTCC GCTCGGGCCT CGGCATCACT GTCGTTCCCG GCTACATCTG CGATTTCGCT CGGCACTTGG GCCTTGTGCT CGTTGAAATT CGAGGTGCCC CAAAGTATCC GGTGGAGCTT TGGCTAGTGC AACGCACCGC CACCCGTCCA TCGCTCGCAG CCTCTGCGTT GCTTGAATGC GTTGAACAGC AACTGGAGAA GCGCCAATAG
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Protein sequence | MNITLKQLRV FCALYELRSF TAAARAAFVT QSAVSKLCAE LESEVGQPLF ERSTRSVTPC EGAADFYTYA QQILSTVRAA ERSMSSLRSL ERGIVGVAAS PMVMYGLLGD PLASYHRNYP GIKLDLYELS TDETITYVRH GKVDMGIVSL EVKDAELATR PIFRDFMYAV CTSDHPLAQE EKVSWSELAK YDHIGLHSAY NVRRSIDRIC EQLHLDIHFK IEASMVTSVL GMVRSGLGIT VVPGYICDFA RHLGLVLVEI RGAPKYPVEL WLVQRTATRP SLAASALLEC VEQQLEKRQ
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