| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2118 |
|---|
| Symbol | |
|---|
| ID | 3242437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2143077 |
|---|
| End bp | 2143961 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637168804 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_189674 |
|---|
| Protein GI | 57865557 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAA AACACATGAA ATACTTTGTT GAAGTTGTCA AACAAGGTGG TATGACAAAC
GCTTCAAAAT CCTTGTATAT TGCGCAACCA ACTATCAGTA AAGCAATTAA GGATATTGAA
GCAGAGATGG CTGTCCCTTT ATTTGACCGG AGTAAAAGAA GTTTAGTACT TACTGATGCA
GGTAAAATTT TTTTCAAGAA ATGTCAAGAA ATCATCGCAC TATATGATAA TTTGCCCACT
GAAATTAATA GTTTGTATGG TTTAGAAACA GGTCATATCA CTATTAGTAT GTCTGCAGTG
ATGAGCATGC GTAAATTTAT TGGCGTATTA GGAGACTTTC ATCAACTTTA TCCGAATATT
ACGTACAACT TAATCGAAAG TGGTGGTAAG ACGACTGAAA ACCTTATACT TAATGATGAA
GTGGATATTG GTGTGACAAC ATTGCCAGTA GATCATCAAA AATTTGAATG TATATCTTTA
AACAAAGAAG AACTGACTGT AGTTTTAAAT AAAGAACATC CTTTAGCACA AAAATCTTCT
ATTAAAATGG AAGAATTAGC TGATGAGAAC TTCATTTTAT TTAATGAAGA TTTCTATCTC
AACGATAAAA TTATTGAAAA TGCGAAGAAT GCTGGATTCG TGCCGAACAT GGCCTCACAA
ATCTCACAAT GGAATGTGAT TGAAAATCTT GTCATTAATC AATTAGGTAT TTCCATATTG
CCAGCCACTA TAGCACAATT ACTTAATGAT GACGTCAAAA TTGTACATTT GGAAAATGCA
CATACAACTT GGGAGCTTGG TGTCGTTTGG AAAAAAGATA AACGTTTAAG TCATGCTACA
AATAAATGGA TAGAATTTTT GAAAGAAAGA TTATCCGAAG AATAA
|
|---|
| Protein sequence | MDIKHMKYFV EVVKQGGMTN ASKSLYIAQP TISKAIKDIE AEMAVPLFDR SKRSLVLTDA
GKIFFKKCQE IIALYDNLPT EINSLYGLET GHITISMSAV MSMRKFIGVL GDFHQLYPNI
TYNLIESGGK TTENLILNDE VDIGVTTLPV DHQKFECISL NKEELTVVLN KEHPLAQKSS
IKMEELADEN FILFNEDFYL NDKIIENAKN AGFVPNMASQ ISQWNVIENL VINQLGISIL
PATIAQLLND DVKIVHLENA HTTWELGVVW KKDKRLSHAT NKWIEFLKER LSEE
|
|---|
| |