Gene Spro_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3129 
Symbol 
ID5604833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3445776 
End bp3446699 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content58% 
IMG OID640938671 
Productnitrogen assimilation transcriptional regulator 
Protein accessionYP_001479357 
Protein GI157371368 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCA GACGTCTTAA GTATTTCGTG AAAATCGTCG ACATCGGCAG CCTGACCCAG 
GCGGCAGAAG TGCTGCATAT CGCCCAACCG GCACTCAGCC AACAATTGGC GACACTGGAA
GGAGAGCTGA AACAGCAGCT GCTGATCCGC ACCAAACGCG GGGTACAGCC TACTGAGGCC
GGTAATATTC TTTATGCCCA TGCCCAGACT ATTTTGCGCC AGTGCGAACA GGCGCAAAGC
GCGGTCAATA GTGCCGGGCA GGCGATGAGC GGGCAGGTCT CTGTCGGGCT GGCCCCGGGC
AGTCTGGCAT CACAGTTGGC GTTGCCGTTG TTGCAGGCGG TGCGCGATCA GCATCCGGGG
ATTTTGCTCA GTCTGAATGA GAATATTGGC TCGACGCTGG CCGGCCAGGT CGCTAACCAA
AACCTGGATA TGGCGGTGAT CTACGGCGCT AAAATGCCCG CAGGTTTGCA GGCCACGGCC
TTAATGCGCG AAGATCTCTA TCTGGTGGCG ACGCGTGCGG TGCCAAACCC TGGCAACAGC
GTTGAGCTGC TGGACGTTGC GCGGCTGAAT TTATTTTTGC CGCGTGAGGG AGACGTGGTA
CGCAGTCAGG TGGACGAAGC CATGGCGATA CGCAAGTTAA CGGCCAACGT GATTGGTGAA
ATTGAATCGC CTGGCACCTT GAGTGCGGCT ATCGCCAGTG GTTTGGGGGC CACCATTTTG
CCAGAGTCGG TGGCGCGCGC GATGATTGGC CCGGCCAAGG CATGGATGGC GCGTATCAAT
GCTCCGTCGC TGAGCGTGCC GCTTTCGCTG TGCATTTCCG GCCAGCAATC CTTGTCGGCC
CCGGCGCTGG TGGTGAAAGA GATCCTGCTG TCAATTGCCG CCAGCCGCAG TCAGGAAAAA
CGCGTGCTGG CGTTGGTGCA ATAA
 
Protein sequence
MNFRRLKYFV KIVDIGSLTQ AAEVLHIAQP ALSQQLATLE GELKQQLLIR TKRGVQPTEA 
GNILYAHAQT ILRQCEQAQS AVNSAGQAMS GQVSVGLAPG SLASQLALPL LQAVRDQHPG
ILLSLNENIG STLAGQVANQ NLDMAVIYGA KMPAGLQATA LMREDLYLVA TRAVPNPGNS
VELLDVARLN LFLPREGDVV RSQVDEAMAI RKLTANVIGE IESPGTLSAA IASGLGATIL
PESVARAMIG PAKAWMARIN APSLSVPLSL CISGQQSLSA PALVVKEILL SIAASRSQEK
RVLALVQ