Gene EcolC_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1657 
Symbol 
ID6067292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1846408 
End bp1847325 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content49% 
IMG OID641601071 
Productnitrogen assimilation transcriptional regulator 
Protein accessionYP_001724640 
Protein GI170019686 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000208245 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00930832 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTTCA GACGCCTGAA ATACTTCGTA AAAATTGTAG ATATTGGTAG CCTGACCCAG 
GCTGCTGAAG TATTGCATAT CGCACAACCA GCGCTCAGCC AGCAGGTTGC CACACTGGAA
GGTGAGTTAA ATCAACAACT TTTGATCCGT ACAAAGCGGG GCGTTACGCC AACAGACGCC
GGAAAAATTC TCTATACCCA TGCGCGGGCC ATTTTACGTC AGTGTGAACA GGCCCAACTG
GCGGTGCATA ACGTTGGTCA GGCATTATCG GGGCAAGTCT CGATTGGCTT TGCACCAGGA
ACCGCTGCGT CATCCATCAC CATGCCCTTA TTACAAGCGG TTCGCGCTGA ATTCCCGGAG
ATCGTTATCT ATCTTCATGA AAATAGCGGT GCAGTGCTTA ACGAAAAACT GATAAATCAC
CAACTCGATA TGGCGGTGAT TTATGAGCAT TCCCCTGTGG CTGGGGTATC CAGTCAGGCT
TTGCTGAAAG AAGATCTTTT CCTGGTAGGA ACTCAAGATT GCCCGGGGCA AAGCGTTGAT
GTTAATGCTA TTGCACAAAT GAACCTTTTT CTCCCCAGTG ATTACAGCGC TGTTAGACTT
CGTGTTGATG AGGCGTTTTC CCTACGGCGG CTCACGGCAA AAGTCATTGG TGAAATTGAG
TCTATTGCTA CGCTTACCGC AGCGATTGCC AGCGGCATGG GCGTTGCAGT ATTACCCGAA
TCGGCCGCGC GTTCGTTATG TGGCGCAGTA AATGGGTGGA TGTCACGCAT TACCACGCCT
TCCATGAGTC TCTCTTTGTC ATTAAATTTA CCCGCCAGAG CGAACTTATC GCCACAGGCA
CAGGCAGTGA AAGAGTTGTT AATGTCAGTG ATTAGTTCTC CAGTGATGGA AAAAAGGCAG
TGGCAATTGG TGAGCTAA
 
Protein sequence
MNFRRLKYFV KIVDIGSLTQ AAEVLHIAQP ALSQQVATLE GELNQQLLIR TKRGVTPTDA 
GKILYTHARA ILRQCEQAQL AVHNVGQALS GQVSIGFAPG TAASSITMPL LQAVRAEFPE
IVIYLHENSG AVLNEKLINH QLDMAVIYEH SPVAGVSSQA LLKEDLFLVG TQDCPGQSVD
VNAIAQMNLF LPSDYSAVRL RVDEAFSLRR LTAKVIGEIE SIATLTAAIA SGMGVAVLPE
SAARSLCGAV NGWMSRITTP SMSLSLSLNL PARANLSPQA QAVKELLMSV ISSPVMEKRQ
WQLVS