Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1657 |
Symbol | |
ID | 6067292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1846408 |
End bp | 1847325 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641601071 |
Product | nitrogen assimilation transcriptional regulator |
Protein accession | YP_001724640 |
Protein GI | 170019686 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000208245 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00930832 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACTTCA GACGCCTGAA ATACTTCGTA AAAATTGTAG ATATTGGTAG CCTGACCCAG GCTGCTGAAG TATTGCATAT CGCACAACCA GCGCTCAGCC AGCAGGTTGC CACACTGGAA GGTGAGTTAA ATCAACAACT TTTGATCCGT ACAAAGCGGG GCGTTACGCC AACAGACGCC GGAAAAATTC TCTATACCCA TGCGCGGGCC ATTTTACGTC AGTGTGAACA GGCCCAACTG GCGGTGCATA ACGTTGGTCA GGCATTATCG GGGCAAGTCT CGATTGGCTT TGCACCAGGA ACCGCTGCGT CATCCATCAC CATGCCCTTA TTACAAGCGG TTCGCGCTGA ATTCCCGGAG ATCGTTATCT ATCTTCATGA AAATAGCGGT GCAGTGCTTA ACGAAAAACT GATAAATCAC CAACTCGATA TGGCGGTGAT TTATGAGCAT TCCCCTGTGG CTGGGGTATC CAGTCAGGCT TTGCTGAAAG AAGATCTTTT CCTGGTAGGA ACTCAAGATT GCCCGGGGCA AAGCGTTGAT GTTAATGCTA TTGCACAAAT GAACCTTTTT CTCCCCAGTG ATTACAGCGC TGTTAGACTT CGTGTTGATG AGGCGTTTTC CCTACGGCGG CTCACGGCAA AAGTCATTGG TGAAATTGAG TCTATTGCTA CGCTTACCGC AGCGATTGCC AGCGGCATGG GCGTTGCAGT ATTACCCGAA TCGGCCGCGC GTTCGTTATG TGGCGCAGTA AATGGGTGGA TGTCACGCAT TACCACGCCT TCCATGAGTC TCTCTTTGTC ATTAAATTTA CCCGCCAGAG CGAACTTATC GCCACAGGCA CAGGCAGTGA AAGAGTTGTT AATGTCAGTG ATTAGTTCTC CAGTGATGGA AAAAAGGCAG TGGCAATTGG TGAGCTAA
|
Protein sequence | MNFRRLKYFV KIVDIGSLTQ AAEVLHIAQP ALSQQVATLE GELNQQLLIR TKRGVTPTDA GKILYTHARA ILRQCEQAQL AVHNVGQALS GQVSIGFAPG TAASSITMPL LQAVRAEFPE IVIYLHENSG AVLNEKLINH QLDMAVIYEH SPVAGVSSQA LLKEDLFLVG TQDCPGQSVD VNAIAQMNLF LPSDYSAVRL RVDEAFSLRR LTAKVIGEIE SIATLTAAIA SGMGVAVLPE SAARSLCGAV NGWMSRITTP SMSLSLSLNL PARANLSPQA QAVKELLMSV ISSPVMEKRQ WQLVS
|
| |