Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0375 |
Symbol | |
ID | 4433807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 342095 |
End bp | 343000 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639666170 |
Product | LysR family transcriptional regulator |
Protein accession | YP_808404 |
Protein GI | 116511188 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.104168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTA AACAATTACG GTACGTCGTC GCCATTGCTA ATAGTGGAAC TTTTCGTGAA GCCTCAGAGC AACTCTTTGT TAGTCAACCC TCAATGTCAA TTGCAGTAAA AGATTTAGAA CAAGAACTTG GCTTTCAAAT TTTTGAAAGA ACAAATACAG GCGTAACTTT GACTATTGAA GGCGAACGAT TTTATGAACA AGCACAAACT GTTTTACGTA ATTTCGAAAG CTTTGAATCG AAATATTCTA AACCTAAAGA ATCAGACAAA ACATTTTCAG TTGCTAGCCA ACATTATGAT TTTTTAGCAC CGGTAGCCGT TGAATTTGCG AAGAAAAATC CCGAAATAAA GAATTTTAGA ATTTTTGAAT CTACCACTTA TAATATTTTA CAAGAAGTTG CACAAGGGCA TAGCGAACTT GGGGTAGTTT ATCTGAATAA ACAAAACCGC TCAGGGATTT TAAGAATGCT CAATAAACTT GAATTAGATT ATGAAGAGAT TTTCTTATCG CAAACGCATA TTTATATTCG CAAAGGACAT CCACTCGCTC AGCGCGAGAC GATTTCAGAT GATGACTTAA AACCGCTAGA TCGTGTTCGA TTTACCCAAG AAAATGAACA GTTTCTTTAC TATTCAGAAG ATTTGGTTGA AACTTTTGAA AATACATTGA TTTATAATGT TACTGACCGA GCTAGTTTAA ACGGTATTTT AGAACGAACA GACGCTTATG CGACAGGTCT TGGCTTTATC GATAAAGCAA GTGTTCACAA CGTGACTGTT GTTCCTATGC AAGGGGATAA TGGAAATAGT TTGATTTTAG TCAAACACCG TGGACATTTA CTTTCAAATG CGGCAACTTC TTATAAACGC AGCCTTGAAG TTTATTTTGA AAACTATGAA TTCTAA
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Protein sequence | MNIKQLRYVV AIANSGTFRE ASEQLFVSQP SMSIAVKDLE QELGFQIFER TNTGVTLTIE GERFYEQAQT VLRNFESFES KYSKPKESDK TFSVASQHYD FLAPVAVEFA KKNPEIKNFR IFESTTYNIL QEVAQGHSEL GVVYLNKQNR SGILRMLNKL ELDYEEIFLS QTHIYIRKGH PLAQRETISD DDLKPLDRVR FTQENEQFLY YSEDLVETFE NTLIYNVTDR ASLNGILERT DAYATGLGFI DKASVHNVTV VPMQGDNGNS LILVKHRGHL LSNAATSYKR SLEVYFENYE F
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