Gene SNSL254_A2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2466 
Symbol 
ID6485956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2388299 
End bp2389177 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content48% 
IMG OID642737801 
Productputative transcriptional regulator 
Protein accessionYP_002041542 
Protein GI194445177 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.11864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTAA CCCAAATCCA CGCCCTGCTT GCCGTACTGG AGTACGGCGG ATTTACCGAA 
GCCAGCAAAC GGCTATACAT GACGCAATCC GCCGTCAGCC AGGCCATCTC CGCGCTTGAG
GAGGAGCTCG GCGTTGACAT ATTGATTCGT GAGCGTCGTA AAGAGATTGA GCTTACCGCC
GCCGGTAGCC GCATCGTCAG GCACTTACGC GCGATCCAGC GCGACGTCAA CGCGGTAAAA
GAGATTGCCG AACAAGAAAA AAAGAACCCG GCCCGTACGC TACGGATTGG CTGTTTTCCC
AGCGCCTGCG CCTGCATTTT ACCCGGCGTC ATTCGCTATT TTGAAAGCCA TCATCCAAAT
GTAAAAATTA TCCCTTATGA AGAGAACAGT ACGGCTATTA TTGATTCGCT GCAGGACGGA
AGTATTGATG CCGGTTTCGT TCCTTTTCCG GTCAACGGTA TGTATTGCGT CCCCATTTAC
CGGGATAAAT TCACCGTAGT GGTGCCTGAA AATCATCCCC TGGCGGCCAA TAGTACGGTA
ACGGTCGAAG AACTGATGGA CGAACCACTT ATTGTCAGTA AAGGTCGTTA TGAATTAAGC
ATTATGGCGT TGTTTAAAGA AAAGGGTATT GAGCCGATAT TTAAATATGA ATTTAACCAT
CCCGATACTG CGCTGAATTT TATTCGCCAG GGATTAGGTA TCGCCTTATT GCCAGAATTA
ACCTTAAAAG CCACGACAGG AAAATTATGC TCCGTGGCGC TGGAACCCAC CTTTTATCGA
CAAATTTCCC TGTTAGCAAA AGAACCGCCG GTAGAAGGAA GTCCGTTATT TTTATTACAA
AAATGTATGG AAACACTGAC CGATGAGGGG TTGCTATAA
 
Protein sequence
MTLTQIHALL AVLEYGGFTE ASKRLYMTQS AVSQAISALE EELGVDILIR ERRKEIELTA 
AGSRIVRHLR AIQRDVNAVK EIAEQEKKNP ARTLRIGCFP SACACILPGV IRYFESHHPN
VKIIPYEENS TAIIDSLQDG SIDAGFVPFP VNGMYCVPIY RDKFTVVVPE NHPLAANSTV
TVEELMDEPL IVSKGRYELS IMALFKEKGI EPIFKYEFNH PDTALNFIRQ GLGIALLPEL
TLKATTGKLC SVALEPTFYR QISLLAKEPP VEGSPLFLLQ KCMETLTDEG LL