Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2466 |
Symbol | |
ID | 6485956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2388299 |
End bp | 2389177 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642737801 |
Product | putative transcriptional regulator |
Protein accession | YP_002041542 |
Protein GI | 194445177 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.11864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTAA CCCAAATCCA CGCCCTGCTT GCCGTACTGG AGTACGGCGG ATTTACCGAA GCCAGCAAAC GGCTATACAT GACGCAATCC GCCGTCAGCC AGGCCATCTC CGCGCTTGAG GAGGAGCTCG GCGTTGACAT ATTGATTCGT GAGCGTCGTA AAGAGATTGA GCTTACCGCC GCCGGTAGCC GCATCGTCAG GCACTTACGC GCGATCCAGC GCGACGTCAA CGCGGTAAAA GAGATTGCCG AACAAGAAAA AAAGAACCCG GCCCGTACGC TACGGATTGG CTGTTTTCCC AGCGCCTGCG CCTGCATTTT ACCCGGCGTC ATTCGCTATT TTGAAAGCCA TCATCCAAAT GTAAAAATTA TCCCTTATGA AGAGAACAGT ACGGCTATTA TTGATTCGCT GCAGGACGGA AGTATTGATG CCGGTTTCGT TCCTTTTCCG GTCAACGGTA TGTATTGCGT CCCCATTTAC CGGGATAAAT TCACCGTAGT GGTGCCTGAA AATCATCCCC TGGCGGCCAA TAGTACGGTA ACGGTCGAAG AACTGATGGA CGAACCACTT ATTGTCAGTA AAGGTCGTTA TGAATTAAGC ATTATGGCGT TGTTTAAAGA AAAGGGTATT GAGCCGATAT TTAAATATGA ATTTAACCAT CCCGATACTG CGCTGAATTT TATTCGCCAG GGATTAGGTA TCGCCTTATT GCCAGAATTA ACCTTAAAAG CCACGACAGG AAAATTATGC TCCGTGGCGC TGGAACCCAC CTTTTATCGA CAAATTTCCC TGTTAGCAAA AGAACCGCCG GTAGAAGGAA GTCCGTTATT TTTATTACAA AAATGTATGG AAACACTGAC CGATGAGGGG TTGCTATAA
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Protein sequence | MTLTQIHALL AVLEYGGFTE ASKRLYMTQS AVSQAISALE EELGVDILIR ERRKEIELTA AGSRIVRHLR AIQRDVNAVK EIAEQEKKNP ARTLRIGCFP SACACILPGV IRYFESHHPN VKIIPYEENS TAIIDSLQDG SIDAGFVPFP VNGMYCVPIY RDKFTVVVPE NHPLAANSTV TVEELMDEPL IVSKGRYELS IMALFKEKGI EPIFKYEFNH PDTALNFIRQ GLGIALLPEL TLKATTGKLC SVALEPTFYR QISLLAKEPP VEGSPLFLLQ KCMETLTDEG LL
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