Gene Caci_8034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8034 
Symbol 
ID8339412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9327928 
End bp9328830 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content72% 
IMG OID644961119 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003118698 
Protein GI256397134 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC GACAGTTGCG CGCGTTCCTC GCGGTGGTGG AGGCCGGCGG CATCTCCGCG 
GCGGCCGACC AGCTCGGCTA CGCGCAGAGC AGCGTCAGCG ACCAGCTGCG CACGCTGGAG
CGCGACCTCG GCACACCGGT CCTGAACCGG ACGAGCATCG GCACGGTGCC CACCGAGGCC
GGGCAGCGCC TGCTGCCGTA CGCGCGCCGC ATGCTGGACC TGGACAGCGA GATGCGCCGC
ACCGTCTCCG GACACCGTCC GCTGCTGCGC ATCGGCGCCC TGCAGTCCCT GGCCGACGAG
TGGCTGCCGG AGATGCTGAC CGCCTTCGAC CACGGCGCGG CCGGTCCTGA GACCGCGGAC
GTCACGGTCA CCGTCACCAG CCGCACCCGG CTGATGGAGG AGCTGCAGGA AGGGCGTCTG
GACGCGGTGT TCACGCTGGA CAGCGGTCCG GCCTACGACG GACCCACAGC GGTGGTCGGC
ACCGACCGCG TGGTGCTGGT GACGGCGCCC TCGCACCCGC TGGCGAGCGT GCACCCGCTG
ACGCTGGAGG ACGTGCGCCG CACCGAGTTC ATGGTGACCG AGATCGGCTG CATCTACCGG
CAGCTCTTCG ACGAGAGCGG CCGCGACCTC GGTCCGTCGC TGAAGATCGC GATGATCACC
GGCTCGCTGA ACGCCTTGCG GCGGCTGACG GTCAACGGCC GCGGCGCCGC GCTGCTGCCG
CGTTTCTCGG TGCAGGCCGA GCTGGACTCC GGCGACCTGG TGATGCTGGA TCTGAAGCAG
GGCCTGGCGC CGCTGACCAT CGAGGCGCGG TGGCGCGAGG GGATCGGGCC GGGGGCGGCG
CCGCTGAAGG CGCTGGTGGA GCTGACGCAG AAGTTCAGCC CGGCGGCTTG GGCGATGGCG
TAG
 
Protein sequence
MDTRQLRAFL AVVEAGGISA AADQLGYAQS SVSDQLRTLE RDLGTPVLNR TSIGTVPTEA 
GQRLLPYARR MLDLDSEMRR TVSGHRPLLR IGALQSLADE WLPEMLTAFD HGAAGPETAD
VTVTVTSRTR LMEELQEGRL DAVFTLDSGP AYDGPTAVVG TDRVVLVTAP SHPLASVHPL
TLEDVRRTEF MVTEIGCIYR QLFDESGRDL GPSLKIAMIT GSLNALRRLT VNGRGAALLP
RFSVQAELDS GDLVMLDLKQ GLAPLTIEAR WREGIGPGAA PLKALVELTQ KFSPAAWAMA