Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8034 |
Symbol | |
ID | 8339412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9327928 |
End bp | 9328830 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961119 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003118698 |
Protein GI | 256397134 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCC GACAGTTGCG CGCGTTCCTC GCGGTGGTGG AGGCCGGCGG CATCTCCGCG GCGGCCGACC AGCTCGGCTA CGCGCAGAGC AGCGTCAGCG ACCAGCTGCG CACGCTGGAG CGCGACCTCG GCACACCGGT CCTGAACCGG ACGAGCATCG GCACGGTGCC CACCGAGGCC GGGCAGCGCC TGCTGCCGTA CGCGCGCCGC ATGCTGGACC TGGACAGCGA GATGCGCCGC ACCGTCTCCG GACACCGTCC GCTGCTGCGC ATCGGCGCCC TGCAGTCCCT GGCCGACGAG TGGCTGCCGG AGATGCTGAC CGCCTTCGAC CACGGCGCGG CCGGTCCTGA GACCGCGGAC GTCACGGTCA CCGTCACCAG CCGCACCCGG CTGATGGAGG AGCTGCAGGA AGGGCGTCTG GACGCGGTGT TCACGCTGGA CAGCGGTCCG GCCTACGACG GACCCACAGC GGTGGTCGGC ACCGACCGCG TGGTGCTGGT GACGGCGCCC TCGCACCCGC TGGCGAGCGT GCACCCGCTG ACGCTGGAGG ACGTGCGCCG CACCGAGTTC ATGGTGACCG AGATCGGCTG CATCTACCGG CAGCTCTTCG ACGAGAGCGG CCGCGACCTC GGTCCGTCGC TGAAGATCGC GATGATCACC GGCTCGCTGA ACGCCTTGCG GCGGCTGACG GTCAACGGCC GCGGCGCCGC GCTGCTGCCG CGTTTCTCGG TGCAGGCCGA GCTGGACTCC GGCGACCTGG TGATGCTGGA TCTGAAGCAG GGCCTGGCGC CGCTGACCAT CGAGGCGCGG TGGCGCGAGG GGATCGGGCC GGGGGCGGCG CCGCTGAAGG CGCTGGTGGA GCTGACGCAG AAGTTCAGCC CGGCGGCTTG GGCGATGGCG TAG
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Protein sequence | MDTRQLRAFL AVVEAGGISA AADQLGYAQS SVSDQLRTLE RDLGTPVLNR TSIGTVPTEA GQRLLPYARR MLDLDSEMRR TVSGHRPLLR IGALQSLADE WLPEMLTAFD HGAAGPETAD VTVTVTSRTR LMEELQEGRL DAVFTLDSGP AYDGPTAVVG TDRVVLVTAP SHPLASVHPL TLEDVRRTEF MVTEIGCIYR QLFDESGRDL GPSLKIAMIT GSLNALRRLT VNGRGAALLP RFSVQAELDS GDLVMLDLKQ GLAPLTIEAR WREGIGPGAA PLKALVELTQ KFSPAAWAMA
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