More than 300 homologs were found in PanDaTox collection
for query gene Dvul_0402 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008751  Dvul_0402  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
398 aa  803    Desulfovibrio vulgaris DP4  Bacteria  normal  0.93747  normal  0.145713 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  56.04 
 
 
523 aa  195  1e-48  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_007643  Rru_A0553  response regulator receiver Signal transduction histidine kinase  33.49 
 
 
440 aa  186  5e-46  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.580246  n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  54.97 
 
 
518 aa  185  1.0000000000000001e-45  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_007643  Rru_A1908  response regulator receiver modulated diguanylate cyclase  51.09 
 
 
519 aa  178  1e-43  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.11693  n/a   
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  49.2 
 
 
337 aa  175  9.999999999999999e-43  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  48.91 
 
 
522 aa  174  2.9999999999999996e-42  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  52.53 
 
 
508 aa  169  6e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_008576  Mmc1_0401  response regulator receiver sensor signal transduction histidine kinase  33.67 
 
 
415 aa  168  1e-40  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.653943 
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  58.04 
 
 
531 aa  167  2.9999999999999998e-40  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_011138  MADE_02571  response regulator  54.11 
 
 
521 aa  167  2.9999999999999998e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  49.08 
 
 
517 aa  167  4e-40  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  48.52 
 
 
578 aa  161  2e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  48.41 
 
 
529 aa  158  1e-37  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  48.21 
 
 
581 aa  158  2e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  49.11 
 
 
580 aa  157  3e-37  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  50.71 
 
 
531 aa  157  4e-37  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  47.62 
 
 
579 aa  157  4e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  47.93 
 
 
580 aa  156  6e-37  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  44.38 
 
 
740 aa  156  7e-37  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  38.43 
 
 
746 aa  154  2e-36  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  47.02 
 
 
582 aa  152  1e-35  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  39.04 
 
 
515 aa  151  2e-35  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01215  Response regulator  46 
 
 
509 aa  150  3e-35  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  45.4 
 
 
520 aa  150  3e-35  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2880  multi-sensor signal transduction histidine kinase  49.1 
 
 
576 aa  150  4e-35  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  45.18 
 
 
536 aa  150  5e-35  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  50.35 
 
 
524 aa  149  7e-35  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  50.32 
 
 
613 aa  149  8e-35  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  46.9 
 
 
523 aa  147  2.0000000000000003e-34  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  46.9 
 
 
523 aa  148  2.0000000000000003e-34  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  46.9 
 
 
523 aa  147  2.0000000000000003e-34  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  52.55 
 
 
550 aa  147  4.0000000000000006e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  45.51 
 
 
522 aa  147  4.0000000000000006e-34  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  47.22 
 
 
523 aa  146  5e-34  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_010172  Mext_2117  histidine kinase  48.19 
 
 
631 aa  146  5e-34  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  47.22 
 
 
523 aa  146  5e-34  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  40.8 
 
 
767 aa  146  5e-34  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.788805 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  48.19 
 
 
593 aa  146  6e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  47.22 
 
 
525 aa  145  1e-33  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  44.74 
 
 
521 aa  144  3e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  44.67 
 
 
526 aa  143  4e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  47.18 
 
 
525 aa  143  5e-33  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  47.18 
 
 
525 aa  143  5e-33  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_004347  SO_2366  response regulator  44.14 
 
 
525 aa  142  9.999999999999999e-33  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  39.13 
 
 
741 aa  141  1.9999999999999998e-32  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  46.43 
 
 
527 aa  140  4.999999999999999e-32  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  40.12 
 
 
513 aa  140  6e-32  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  40.12 
 
 
513 aa  140  6e-32  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  39.86 
 
 
432 aa  140  6e-32  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  40.12 
 
 
513 aa  139  6e-32  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  42.86 
 
 
513 aa  139  7.999999999999999e-32  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  41.52 
 
 
525 aa  139  1e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  43.14 
 
 
512 aa  136  6.0000000000000005e-31  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_011894  Mnod_1253  response regulator receiver sensor signal transduction histidine kinase  47.9 
 
 
584 aa  136  7.000000000000001e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  43.97 
 
 
523 aa  134  1.9999999999999998e-30  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  40.82 
 
 
471 aa  134  3e-30  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3810  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.36 
 
 
763 aa  129  1.0000000000000001e-28  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_1361  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  38.95 
 
 
746 aa  128  2.0000000000000002e-28  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0239  PAS/PAC sensor hybrid histidine kinase  42.11 
 
 
565 aa  126  7e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1996  response regulator receiver sensor signal transduction histidine kinase  47.62 
 
 
584 aa  125  1e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.0327436  normal  0.170409 
 
 
-
 
NC_010505  Mrad2831_3287  response regulator receiver sensor signal transduction histidine kinase  46.99 
 
 
584 aa  124  2e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847642  normal 
 
 
-
 
NC_009052  Sbal_3403  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.77 
 
 
744 aa  124  2e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0967  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.77 
 
 
744 aa  124  3e-27  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0933  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.77 
 
 
744 aa  124  3e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0868  diguanylate cyclase/phosphodiesterase  40.49 
 
 
743 aa  123  6e-27  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0959  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.2 
 
 
744 aa  120  3e-26  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0659  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  40.54 
 
 
766 aa  119  7.999999999999999e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4124  response regulator receiver protein  35.4 
 
 
172 aa  117  3.9999999999999997e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2017  integral membrane sensor signal transduction histidine kinase  33.18 
 
 
422 aa  113  6e-24  Geobacter uraniireducens Rf4  Bacteria  normal  0.224575  n/a   
 
 
-
 
NC_009654  Mmwyl1_4383  response regulator receiver modulated diguanylate phosphodiesterase  41.3 
 
 
733 aa  111  2.0000000000000002e-23  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3036  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  42.38 
 
 
758 aa  109  9.000000000000001e-23  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.830853 
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  52.63 
 
 
437 aa  106  7e-22  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2683  histidine kinase  34.08 
 
 
490 aa  105  1e-21  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000711589 
 
 
-
 
NC_011146  Gbem_1533  integral membrane sensor signal transduction histidine kinase  32.27 
 
 
488 aa  102  1e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1700  PAS/PAC sensor signal transduction histidine kinase  32.58 
 
 
591 aa  101  2e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_3206  PAS/PAC sensor signal transduction histidine kinase  32.96 
 
 
428 aa  99.4  9e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0402  GAF sensor signal transduction histidine kinase  29.73 
 
 
469 aa  98.6  2e-19  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00245745  n/a   
 
 
-
 
NC_007517  Gmet_1057  histidine kinase  30.09 
 
 
673 aa  95.9  1e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0263803 
 
 
-
 
NC_008751  Dvul_0233  PAS/PAC sensor signal transduction histidine kinase  30.41 
 
 
553 aa  95.9  1e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  0.446176  normal 
 
 
-
 
NC_007520  Tcr_1445  PAS/PAC sensor signal transduction histidine kinase  31.47 
 
 
390 aa  95.1  2e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1311  sensory histidine kinase AtoS  30.65 
 
 
614 aa  93.2  6e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3601  response regulator receiver sensor signal transduction histidine kinase  29.1 
 
 
399 aa  92.4  1e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0853  GAF sensor signal transduction histidine kinase  27.73 
 
 
543 aa  92.4  1e-17  Geobacter uraniireducens Rf4  Bacteria  normal  0.0172043  n/a   
 
 
-
 
NC_011769  DvMF_2148  multi-sensor signal transduction histidine kinase  31.3 
 
 
729 aa  91.7  2e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_1966  PAS/PAC sensor signal transduction histidine kinase  27.66 
 
 
492 aa  91.7  2e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.917004  n/a   
 
 
-
 
NC_009483  Gura_3414  integral membrane sensor signal transduction histidine kinase  30.84 
 
 
406 aa  90.1  6e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1949  PAS/PAC sensor signal transduction histidine kinase  26.48 
 
 
378 aa  90.1  7e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.154084  normal 
 
 
-
 
NC_010814  Glov_1744  response regulator receiver sensor signal transduction histidine kinase  24.86 
 
 
376 aa  89.4  1e-16  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000105238  n/a   
 
 
-
 
NC_008609  Ppro_3078  signal transduction histidine kinase, nitrogen specific, NtrB  30.04 
 
 
369 aa  89  1e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0775  sensor histidine kinase  30.6 
 
 
674 aa  88.6  2e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1422  integral membrane sensor signal transduction histidine kinase  26.63 
 
 
655 aa  88.2  2e-16  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000957952  n/a   
 
 
-
 
NC_011883  Ddes_0768  PAS/PAC sensor signal transduction histidine kinase  36.07 
 
 
673 aa  88.6  2e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.670648  n/a   
 
 
-
 
NC_007519  Dde_0505  PAS/PAC sensor signal transduction histidine kinase  26.43 
 
 
498 aa  88.2  2e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1277  periplasmic sensor signal transduction histidine kinase  36.13 
 
 
630 aa  88.6  2e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.449456  n/a   
 
 
-
 
NC_007901  Rfer_4413  response regulator receiver sensor signal transduction histidine kinase  35.19 
 
 
565 aa  88.2  2e-16  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU0471  sensor histidine kinase  35.14 
 
 
419 aa  87.8  3e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.328588  n/a   
 
 
-
 
NC_010814  Glov_2787  signal transduction histidine kinase, nitrogen specific, NtrB  31.15 
 
 
365 aa  87.8  3e-16  Geobacter lovleyi SZ  Bacteria  normal  0.220649  n/a   
 
 
-
 
NC_008609  Ppro_0420  GAF sensor signal transduction histidine kinase  29.51 
 
 
458 aa  87.8  3e-16  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00956949  n/a   
 
 
-
 
NC_012850  Rleg_0314  histidine kinase  29.52 
 
 
531 aa  87.4  4e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
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