| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5276 |
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| Symbol | |
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| ID | 6412977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5691691 |
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| End bp | 5693430 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642715166 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_001994238 |
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| Protein GI | 192293633 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.606728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACC AGGACGATAT CCTCGAGCTG ATCGAAGACA CGGATTCGAC GCCGGAGGTA
TCGGGCGCAC GGAAATGGAA GATCGCGGTG ATCGACGACG ACACCGCGGT CCACGACGGC
ACCCGCTTTG CGCTGAGCGA CTACAGCCTC AACAATCAGG GGTTGGAGAT CCTGTCGGCC
TATTCGGGCG CCGAAGGCCG CGAACTGATG CGGGCCCACC CCGATATCGC CGCGGTGCTG
CTCGACGTCA TCATGGAGAC CGACGCCGCC GGCCTCGACC TGGTGGAGTT CATCCGCAAC
GATCTGAAGA ACGAGACCGT ACGGATCATC CTGCGCACCG GCCAGCCAGG CCAGGCGCCC
GAGCGCCGCG TCATCGTCGA CTACGACATC AACGACTACA AGGCCAAGAC CGAGCTCACC
GCCGACAAGC TGTTCACCTC GCTGACCGCG GCGCTGCGCA GCTATCAGCA GCTCGAACGG
ATGGTGCAGA CCCGGCGCGG CCTCGAAATC ATCATCGACG CCGCCTCGAC GCTGTACGAC
TTCAAATCGA TGCAGCGACT CGCCGAAGGC GTGCTGACCC AGCTCGCCTC GCTGCTCAAT
GTCGATTGCG CCGGTATCTT GGTCTTACGC GACGCCGGCG ACGAACTGGC GGTTCTAGCC
GGCTCGGGCT GCTACAGCCG CTTCATCGGC ACCACAGGCC ACAGCAATTC GCTCGACCCG
GACCTTCGTC AGATGGTCGA GGAAGCGTTC CGGCGGCGGA AGCACGAGTT CGCCGACCAT
CGCACTGTGC TTTATATCCG GACCGGAAGC GGCCGCGAGG TGGTGGTACT GCTGCAGGCC
GAGCGCGAAC TGTCGGACAC CGACCGTTCG CTGGTCGAAA TCTTCGGCAG CCGGCTGTCG
ATCGCCTTCG ACAATGTCAT CCTGTATCGG CAGCTGCACG AGGCCAACAC CCAGCTCGAA
GAGCGGGTGG CTCAGCGCAC CCGGGCGCTG ACCCAGGCCA ACCGCCGGCT GTCGACGCAG
TGGCTGCGGC TGCAGCGCGC CAATGCGTTC AAGAACGAGA TCCTCGGCAC CGTCGCCCAC
GACTTGAAGA ACCCGCTCGG CGTCATCCTC GGCCGCACCG AGATGCTGAC CGAGCTGATC
GGCGCAGAAT CCTCCAAGGA CCATGTCATC GCCCAGGTCG ATCATATCCG CGACGCCACA
CGGCGGTTGA CGCTGATGGT CGATCATCTG ATTTCCGACG CGATGGCGGA TGCGTTCGAC
ATCTCGATCC GGCGCGAGGC CGTCGACATC GCCTCGCTGG TCGGTGAGGT CGCCGAGGCC
AATCGGCCGA TGGCGCAGAA CAAGCAGCAG GTGATTTCGG TGTCCACACC GGAGGCCTGC
TCGACGATGT GCGATTCCGA CCGGATGCGC GAGGCGATCG ACAATCTGGT CAGCAACGCC
ATCAAATACA GCCCGATCGG CGGCAACATC GCCCTGCAGG TCGACGGTGA TGGCGACAGC
ACCATGATCC GCGTCACCGA CGAGGGCGCA GGCCTGTCGC CGGAAGACCT GAGCCGGCTG
TTCGGACGCT TCCAGCGGCT TTCCGCCAAG CCGACCGCGG GCGAAAGCTC GACCGGCCTT
GGGTTGTCGA TCGTCAAGAA GATCGTCGAC ATGCACGGCG GCGAGATCAT CGCCGAGAGC
CCCGGCCCCG GTCAGGGCTC GACCTTCACC ATCATTCTGC CCGCAGCGCC GGTGTCATGA
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| Protein sequence | MADQDDILEL IEDTDSTPEV SGARKWKIAV IDDDTAVHDG TRFALSDYSL NNQGLEILSA
YSGAEGRELM RAHPDIAAVL LDVIMETDAA GLDLVEFIRN DLKNETVRII LRTGQPGQAP
ERRVIVDYDI NDYKAKTELT ADKLFTSLTA ALRSYQQLER MVQTRRGLEI IIDAASTLYD
FKSMQRLAEG VLTQLASLLN VDCAGILVLR DAGDELAVLA GSGCYSRFIG TTGHSNSLDP
DLRQMVEEAF RRRKHEFADH RTVLYIRTGS GREVVVLLQA ERELSDTDRS LVEIFGSRLS
IAFDNVILYR QLHEANTQLE ERVAQRTRAL TQANRRLSTQ WLRLQRANAF KNEILGTVAH
DLKNPLGVIL GRTEMLTELI GAESSKDHVI AQVDHIRDAT RRLTLMVDHL ISDAMADAFD
ISIRREAVDI ASLVGEVAEA NRPMAQNKQQ VISVSTPEAC STMCDSDRMR EAIDNLVSNA
IKYSPIGGNI ALQVDGDGDS TMIRVTDEGA GLSPEDLSRL FGRFQRLSAK PTAGESSTGL
GLSIVKKIVD MHGGEIIAES PGPGQGSTFT IILPAAPVS
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