Gene Mpop_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2070 
Symbol 
ID6308993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2228243 
End bp2230084 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content71% 
IMG OID642650794 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_001924768 
Protein GI188581323 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG ACTGGCTCGA ACTGATTCCC GACGAGGCCG CGGAGGCGCC GGGCCGCGCC 
GGCACCTGGA CGATTGCCGT GATCGACGAC GATCCGGCCG TCCACGAGGG CACCCGCTAC
GCGCTCGCCG GCTACAGCCT CGACGGGCGT GGGCTCGACA TCCTCTCGGC CCATTCGGGC
CAGGAGGCCC GAGCGCTGCT GGCCGAGCGG CGCGACGTCG CCATCGTGCT GCTCGACGTG
GTGATGGAGA CCGACGATGC CGGCCTCCAA CTCATCGATT ACATCCGCCG GGAGCTGAAG
GAGGAGACCG TCCGGATCAT CCTGCGCACC GGCCAGCCGG GGCAGGCGCC GGAGCGGCGC
GTCATCGTCG ATTACGACAT CAACGACTAC AAGGCGAAGA CCGAACTCAC CGCCGACAAG
CTTTTCACCA GCCTCACCGC GGCCTTGCGG GCCTACCAGC AGCTCCGGCG GCTCGACGAG
ACCCGGCGGG GCCTGGAGAT CATCATCGAC GCCGCGCCGA TGCTGCTCGA CCACAAATCG
ATGCAGCGGC TCGCCGAAGG CGTGCTGACC CAGGTCGCCT CGCTCCTCAA CGTCGATTGC
GCCGGCATCC TCGTCCTGCG CGAGGACGAG CGGGAGGCCG GCGACCGGGC GCCTGCGGGA
TCCGATGGGG CGCCCCAAGG TGGATTCGAA GGCGGCTCCA AAGGCGGGCC GCAGGGCGGC
TTCTGCGTGC TGGCGGGTTC CGGGCTCTAT GGCGGCTATG TCGGCCGCGA TCCCGGCTGG
CCGCTCGATC CCGGCATCCA GCCCCTGGTC GAGCAGGCCT TCGCCGCGCG CCGCCACAGC
TTCGGCGACG GTCTCTCCAC GCTCTACGTC CAGACCGCGA GCGGCAGCGA GATCGTGGCG
CTGATCGACA CCGACCGCCC GCTCTCCGAC ACCGACCGCG CGCTGATCAC CCTGCTGGCG
GGGCGCCTCT CCGTCGCCTT CGACAACGTG ATCCTCTACG AGCGGCTGCA GCGCGCCAAC
GTCACCCTGG AGCAGCGCGT CGTCGAGCGC ACCGCCGAGC TGATCCGCGC CAACCGCCGC
CTCGACATGC AGCGCTCGGA CCTGCGCCGG GCCAACAGCC TCAAGACCGA GATCCTGGGC
ACCATCGCCC ACGACCTGAA GAACCCGCTC TCGGTGATCC TCGGCCGCTC CGAGATGCTG
ACCGACCTGA TCGGCCTGGA TCAGGGGGCG GCCCCCGGAT CCGACGACGC GCGGGCGGCC
ATGCGGACCC AGGTGGATCA CATCCGCACC TCGGCGACCC GCCTGATCGA CATGATCGAC
AGCCTCATGG CCGACGCCAT GAACGACGCC CTCGACATCA CCCTGCGCCG CGAGCCCGTC
GACCTCGCCG GTCTCGCCCG CGAGGTCTGC GAGGCCAACC GGCCGCTGGC CGAATCGAAG
GGGCAGCGCC TGATCACGGA CCTCGCCGGT CCGCTCCAGC TCTGCGGCGA CGCCGAGCGG
CTGCGCGAGG CGCTCGACAA CCTCGTCTCG AACGCGATCA AGTATTCCTA TCCGGGCGGC
ACGATCACGG TGCGCGTGCG GGCGGAAGCG GGCGACTACG TCTGCGCCGT GGCCGACCAG
GGCCCCGGCC TGTCGCCGGA GGATGCCGGC CGCCTGTTCG GCCGATACCA GCGCCTCTCG
GCCAAGCCCA CCGGCGGCGA GGGCTCGACG GGGCTCGGCC TCTCCATCGT CAAGCGCATC
GCCGAACTCC ACGGCGGCCG CGCCGAGGCG TCCTCCGACG GGCCGGGGCA GGGCGCCGTG
TTCTCGATGC GCTTCCCGAA GGAGGCGGTG GGGGTGCCTT AG
 
Protein sequence
MDDDWLELIP DEAAEAPGRA GTWTIAVIDD DPAVHEGTRY ALAGYSLDGR GLDILSAHSG 
QEARALLAER RDVAIVLLDV VMETDDAGLQ LIDYIRRELK EETVRIILRT GQPGQAPERR
VIVDYDINDY KAKTELTADK LFTSLTAALR AYQQLRRLDE TRRGLEIIID AAPMLLDHKS
MQRLAEGVLT QVASLLNVDC AGILVLREDE REAGDRAPAG SDGAPQGGFE GGSKGGPQGG
FCVLAGSGLY GGYVGRDPGW PLDPGIQPLV EQAFAARRHS FGDGLSTLYV QTASGSEIVA
LIDTDRPLSD TDRALITLLA GRLSVAFDNV ILYERLQRAN VTLEQRVVER TAELIRANRR
LDMQRSDLRR ANSLKTEILG TIAHDLKNPL SVILGRSEML TDLIGLDQGA APGSDDARAA
MRTQVDHIRT SATRLIDMID SLMADAMNDA LDITLRREPV DLAGLAREVC EANRPLAESK
GQRLITDLAG PLQLCGDAER LREALDNLVS NAIKYSYPGG TITVRVRAEA GDYVCAVADQ
GPGLSPEDAG RLFGRYQRLS AKPTGGEGST GLGLSIVKRI AELHGGRAEA SSDGPGQGAV
FSMRFPKEAV GVP