More than 300 homologs were found in PanDaTox collection
for query gene Mpop_2070 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007406  Nwi_3058  phage head-tail adaptor, putative  58.98 
 
 
580 aa  642    Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  58.33 
 
 
579 aa  662    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_010505  Mrad2831_3287  response regulator receiver sensor signal transduction histidine kinase  74.68 
 
 
584 aa  868    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847642  normal 
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  58.68 
 
 
578 aa  664    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  58.55 
 
 
582 aa  671    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  59.55 
 
 
550 aa  640    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  58.98 
 
 
580 aa  668    Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_011894  Mnod_1253  response regulator receiver sensor signal transduction histidine kinase  70.52 
 
 
584 aa  793    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  59.17 
 
 
581 aa  679    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
613 aa  1217    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1996  response regulator receiver sensor signal transduction histidine kinase  70.45 
 
 
584 aa  779    Methylobacterium sp. 4-46  Bacteria  normal  0.0327436  normal  0.170409 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  90.52 
 
 
593 aa  1087    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2117  histidine kinase  90.2 
 
 
631 aa  1081    Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  45.19 
 
 
337 aa  243  1e-62  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02571  response regulator  40.19 
 
 
521 aa  224  3e-57  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  37.9 
 
 
522 aa  223  6e-57  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  37.17 
 
 
746 aa  219  8.999999999999998e-56  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  38.48 
 
 
518 aa  218  2e-55  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  38.82 
 
 
524 aa  217  4e-55  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_004347  SO_2366  response regulator  36.83 
 
 
525 aa  213  7.999999999999999e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  35.01 
 
 
517 aa  213  7.999999999999999e-54  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  37.27 
 
 
523 aa  213  1e-53  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  37.27 
 
 
523 aa  213  1e-53  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  37.58 
 
 
525 aa  210  5e-53  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  37.58 
 
 
525 aa  210  5e-53  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  36.64 
 
 
525 aa  210  5e-53  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  35.71 
 
 
526 aa  209  2e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  36.65 
 
 
523 aa  207  4e-52  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  36.65 
 
 
523 aa  207  4e-52  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  36.65 
 
 
523 aa  207  5e-52  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  36.48 
 
 
741 aa  205  2e-51  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  38.34 
 
 
536 aa  204  4e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0659  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  38.51 
 
 
766 aa  204  5e-51  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  35 
 
 
523 aa  203  8e-51  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  33.83 
 
 
529 aa  202  9.999999999999999e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  35.47 
 
 
767 aa  201  3.9999999999999996e-50  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.788805 
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  34.47 
 
 
521 aa  199  1.0000000000000001e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  37.74 
 
 
531 aa  199  1.0000000000000001e-49  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  34.72 
 
 
531 aa  197  4.0000000000000005e-49  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  34.57 
 
 
740 aa  194  3e-48  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  34.47 
 
 
523 aa  194  4e-48  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_007912  Sde_1361  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.23 
 
 
746 aa  189  9e-47  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  32.58 
 
 
513 aa  189  1e-46  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  32.58 
 
 
513 aa  189  1e-46  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  32.58 
 
 
513 aa  188  2e-46  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  32.58 
 
 
513 aa  188  2e-46  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  29.44 
 
 
515 aa  182  2e-44  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  33.95 
 
 
527 aa  181  4.999999999999999e-44  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  34.39 
 
 
522 aa  178  3e-43  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01215  Response regulator  31.37 
 
 
509 aa  177  4e-43  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  31.76 
 
 
520 aa  176  9.999999999999999e-43  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3810  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.23 
 
 
763 aa  172  1e-41  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  35.71 
 
 
508 aa  171  4e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_007643  Rru_A0553  response regulator receiver Signal transduction histidine kinase  59.03 
 
 
440 aa  170  7e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.580246  n/a   
 
 
-
 
NC_010002  Daci_3036  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.48 
 
 
758 aa  169  1e-40  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.830853 
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  37.5 
 
 
437 aa  167  4e-40  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2551  ATP-binding region ATPase domain protein  39 
 
 
398 aa  167  5e-40  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  31.19 
 
 
512 aa  160  6e-38  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  29.65 
 
 
525 aa  159  1e-37  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_007643  Rru_A1908  response regulator receiver modulated diguanylate cyclase  41.85 
 
 
519 aa  157  6e-37  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.11693  n/a   
 
 
-
 
NC_008577  Shewana3_0868  diguanylate cyclase/phosphodiesterase  42.05 
 
 
743 aa  150  8e-35  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0402  response regulator receiver sensor signal transduction histidine kinase  50.32 
 
 
398 aa  149  1.0000000000000001e-34  Desulfovibrio vulgaris DP4  Bacteria  normal  0.93747  normal  0.145713 
 
 
-
 
NC_008751  Dvul_2880  multi-sensor signal transduction histidine kinase  45.36 
 
 
576 aa  148  2.0000000000000003e-34  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1131  response regulator receiver sensor signal transduction histidine kinase  38.3 
 
 
500 aa  147  5e-34  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009997  Sbal195_0967  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  31.45 
 
 
744 aa  147  5e-34  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0959  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  31.13 
 
 
744 aa  147  7.0000000000000006e-34  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3403  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  31.13 
 
 
744 aa  146  9e-34  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1483  integral membrane sensor signal transduction histidine kinase  33.24 
 
 
477 aa  146  1e-33  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0933  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  31.13 
 
 
744 aa  146  1e-33  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2670  histidine kinase  34.18 
 
 
352 aa  145  2e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1190  histidine kinase  37.21 
 
 
646 aa  143  9e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  43.15 
 
 
432 aa  143  9.999999999999999e-33  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007901  Rfer_4413  response regulator receiver sensor signal transduction histidine kinase  25.3 
 
 
565 aa  142  1.9999999999999998e-32  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_009675  Anae109_0539  multi-sensor hybrid histidine kinase  28.48 
 
 
816 aa  139  2e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.146269  normal 
 
 
-
 
NC_011831  Cagg_0838  GAF sensor signal transduction histidine kinase  34.18 
 
 
461 aa  139  2e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4383  response regulator receiver modulated diguanylate phosphodiesterase  28.21 
 
 
733 aa  139  2e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1282  PAS/PAC sensor signal transduction histidine kinase  36.8 
 
 
548 aa  137  8e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.153514  normal  0.0403413 
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  40.65 
 
 
471 aa  136  9.999999999999999e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4245  multi-sensor hybrid histidine kinase  37.45 
 
 
654 aa  136  9.999999999999999e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1010  histidine kinase  32.63 
 
 
572 aa  135  1.9999999999999998e-30  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0817847 
 
 
-
 
NC_008554  Sfum_2006  integral membrane sensor signal transduction histidine kinase  35.63 
 
 
469 aa  135  1.9999999999999998e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1933  ATPase domain-containing protein  36.07 
 
 
535 aa  135  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  0.493372  n/a   
 
 
-
 
NC_009523  RoseRS_3771  multi-sensor signal transduction histidine kinase  35.92 
 
 
1039 aa  135  3e-30  Roseiflexus sp. RS-1  Bacteria  normal  unclonable  0.0000191257 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  34.94 
 
 
378 aa  134  3.9999999999999996e-30  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_013385  Adeg_1898  integral membrane sensor signal transduction histidine kinase  34.42 
 
 
546 aa  134  3.9999999999999996e-30  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0401  response regulator receiver sensor signal transduction histidine kinase  38.36 
 
 
415 aa  134  5e-30  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.653943 
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  35.42 
 
 
1218 aa  132  1.0000000000000001e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_007519  Dde_0239  PAS/PAC sensor hybrid histidine kinase  44.26 
 
 
565 aa  132  2.0000000000000002e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1802  GAF sensor signal transduction histidine kinase  32.47 
 
 
456 aa  131  3e-29  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2925  diguanylate cyclase/phosphodiesterase / diguanylate cyclase  29.67 
 
 
743 aa  131  3e-29  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.249336 
 
 
-
 
NC_011662  Tmz1t_1369  GAF sensor signal transduction histidine kinase  33.01 
 
 
767 aa  131  4.0000000000000003e-29  Thauera sp. MZ1T  Bacteria  normal  0.0713189  n/a   
 
 
-
 
NC_007604  Synpcc7942_0644  GAF sensor hybrid histidine kinase  31.72 
 
 
754 aa  130  5.0000000000000004e-29  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03078  sensor histidine kinase  35.4 
 
 
678 aa  130  9.000000000000001e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3142  multi-sensor hybrid histidine kinase  33.81 
 
 
1352 aa  129  1.0000000000000001e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1418  GAF sensor hybrid histidine kinase  28.8 
 
 
853 aa  129  1.0000000000000001e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.237881  normal 
 
 
-
 
NC_007511  Bcep18194_B1640  PAS/PAC sensor hybrid histidine kinase  38.87 
 
 
672 aa  129  2.0000000000000002e-28  Burkholderia sp. 383  Bacteria  normal  0.934605  normal  0.169753 
 
 
-
 
NC_010515  Bcenmc03_5978  PAS/PAC sensor hybrid histidine kinase  38.24 
 
 
656 aa  129  2.0000000000000002e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.410257  normal 
 
 
-
 
NC_007796  Mhun_2689  multi-sensor signal transduction histidine kinase  32.83 
 
 
646 aa  129  2.0000000000000002e-28  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.119288 
 
 
-
 
NC_008391  Bamb_3793  multi-sensor hybrid histidine kinase  36.4 
 
 
664 aa  129  2.0000000000000002e-28  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.191798 
 
 
-
 
NC_008699  Noca_0194  ATPase domain-containing protein  34.85 
 
 
549 aa  129  2.0000000000000002e-28  Nocardioides sp. JS614  Bacteria  normal  0.357239  n/a   
 
 
-
 
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