More than 300 homologs were found in PanDaTox collection
for query gene MADE_02571 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_02571  response regulator  100 
 
 
521 aa  1072    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  52.27 
 
 
517 aa  540  9.999999999999999e-153  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  42.07 
 
 
522 aa  423  1e-117  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  41.39 
 
 
526 aa  417  9.999999999999999e-116  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_004347  SO_2366  response regulator  41.06 
 
 
525 aa  413  1e-114  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  42.97 
 
 
523 aa  412  1e-114  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  42.77 
 
 
523 aa  412  1e-114  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  43.57 
 
 
523 aa  415  1e-114  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  42.97 
 
 
523 aa  412  1e-114  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  43.22 
 
 
524 aa  414  1e-114  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  42.77 
 
 
523 aa  412  1e-114  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  42.89 
 
 
525 aa  410  1e-113  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  42.89 
 
 
525 aa  410  1e-113  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  42.77 
 
 
523 aa  410  1e-113  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  41.87 
 
 
518 aa  409  1e-113  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  41.97 
 
 
523 aa  408  1.0000000000000001e-112  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  42.46 
 
 
525 aa  405  1.0000000000000001e-112  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  42.06 
 
 
521 aa  404  1e-111  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  43.98 
 
 
536 aa  404  1e-111  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  42.89 
 
 
527 aa  403  1e-111  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  42.02 
 
 
531 aa  389  1e-107  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_011138  MADE_01215  Response regulator  38.18 
 
 
509 aa  362  1e-98  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  39.17 
 
 
515 aa  361  2e-98  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  38.09 
 
 
513 aa  358  9.999999999999999e-98  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  37.89 
 
 
513 aa  358  1.9999999999999998e-97  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  37.89 
 
 
513 aa  358  1.9999999999999998e-97  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  40.12 
 
 
508 aa  357  1.9999999999999998e-97  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  37.89 
 
 
513 aa  358  1.9999999999999998e-97  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  39.31 
 
 
520 aa  355  8.999999999999999e-97  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  37.33 
 
 
522 aa  333  3e-90  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  41.75 
 
 
437 aa  311  2e-83  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  37.04 
 
 
529 aa  303  5.000000000000001e-81  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  36.68 
 
 
531 aa  301  2e-80  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  35.99 
 
 
512 aa  298  1e-79  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  33.07 
 
 
525 aa  294  2e-78  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  33.75 
 
 
471 aa  275  2.0000000000000002e-72  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  42.14 
 
 
581 aa  246  6e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  41.85 
 
 
578 aa  243  3.9999999999999997e-63  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  40.96 
 
 
579 aa  240  4e-62  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  42.01 
 
 
580 aa  240  4e-62  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  44.37 
 
 
550 aa  239  5.999999999999999e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  41.07 
 
 
580 aa  236  9e-61  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  41.38 
 
 
741 aa  233  5e-60  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  41.45 
 
 
582 aa  232  1e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2117  histidine kinase  40.43 
 
 
631 aa  228  2e-58  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  40.43 
 
 
593 aa  227  3e-58  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.94 
 
 
746 aa  228  3e-58  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  39.05 
 
 
613 aa  224  3e-57  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1253  response regulator receiver sensor signal transduction histidine kinase  40.29 
 
 
584 aa  223  6e-57  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  37.32 
 
 
337 aa  222  1.9999999999999999e-56  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  53.81 
 
 
740 aa  213  4.9999999999999996e-54  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_010511  M446_1996  response regulator receiver sensor signal transduction histidine kinase  40.81 
 
 
584 aa  211  2e-53  Methylobacterium sp. 4-46  Bacteria  normal  0.0327436  normal  0.170409 
 
 
-
 
NC_010505  Mrad2831_3287  response regulator receiver sensor signal transduction histidine kinase  38.6 
 
 
584 aa  211  3e-53  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847642  normal 
 
 
-
 
NC_009718  Fnod_1101  response regulator receiver modulated metal dependent phosphohydrolase  27.88 
 
 
450 aa  209  1e-52  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  35.78 
 
 
767 aa  201  3e-50  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.788805 
 
 
-
 
NC_007643  Rru_A0553  response regulator receiver Signal transduction histidine kinase  49.76 
 
 
440 aa  184  3e-45  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.580246  n/a   
 
 
-
 
NC_007643  Rru_A0659  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  38.13 
 
 
766 aa  182  2e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3036  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.88 
 
 
758 aa  176  7e-43  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.830853 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  41.87 
 
 
331 aa  174  1.9999999999999998e-42  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1361  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.96 
 
 
746 aa  173  6.999999999999999e-42  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3810  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.28 
 
 
763 aa  172  1e-41  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0306  metal dependent phosphohydrolase  41.03 
 
 
361 aa  171  4e-41  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0402  response regulator receiver sensor signal transduction histidine kinase  49.41 
 
 
398 aa  169  9e-41  Desulfovibrio vulgaris DP4  Bacteria  normal  0.93747  normal  0.145713 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  41 
 
 
343 aa  168  2.9999999999999998e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_007643  Rru_A1908  response regulator receiver modulated diguanylate cyclase  41.59 
 
 
519 aa  168  2.9999999999999998e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.11693  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  42.79 
 
 
338 aa  167  5.9999999999999996e-40  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  42.79 
 
 
338 aa  167  5.9999999999999996e-40  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  42 
 
 
340 aa  167  5.9999999999999996e-40  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  42.79 
 
 
338 aa  166  6.9999999999999995e-40  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  42.79 
 
 
338 aa  166  6.9999999999999995e-40  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  44.62 
 
 
339 aa  166  1.0000000000000001e-39  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  39.41 
 
 
268 aa  165  2.0000000000000002e-39  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  43 
 
 
338 aa  165  2.0000000000000002e-39  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  43.01 
 
 
339 aa  164  4.0000000000000004e-39  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  42.5 
 
 
338 aa  163  6e-39  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  42 
 
 
338 aa  163  8.000000000000001e-39  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  42 
 
 
338 aa  163  8.000000000000001e-39  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  42.39 
 
 
353 aa  162  1e-38  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_010725  Mpop_4963  response regulator receiver modulated metal dependent phosphohydrolase  41.35 
 
 
350 aa  162  2e-38  Methylobacterium populi BJ001  Bacteria  normal  0.102256  normal  0.0892849 
 
 
-
 
NC_010505  Mrad2831_2085  response regulator receiver modulated metal dependent phosphohydrolase  43.58 
 
 
345 aa  161  2e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.931733  normal  0.012958 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  39.9 
 
 
328 aa  162  2e-38  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0591  putative membrane associated signaling protein  40.59 
 
 
596 aa  161  3e-38  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  40.5 
 
 
348 aa  160  5e-38  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
348 aa  160  7e-38  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3915  response regulator receiver modulated metal dependent phosphohydrolase  39.71 
 
 
356 aa  159  9e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  42 
 
 
339 aa  159  1e-37  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  41.62 
 
 
367 aa  159  1e-37  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  41.45 
 
 
331 aa  158  2e-37  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  38.18 
 
 
353 aa  158  2e-37  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  40.93 
 
 
331 aa  158  3e-37  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  39.09 
 
 
331 aa  157  3e-37  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  39.09 
 
 
331 aa  157  3e-37  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
350 aa  157  4e-37  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5340  response regulator receiver modulated metal dependent phosphohydrolase  41.06 
 
 
348 aa  157  5.0000000000000005e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.64097  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  39.9 
 
 
338 aa  157  6e-37  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4449  metal-dependent phosphohydrolase  44.69 
 
 
358 aa  157  6e-37  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.508967 
 
 
-
 
NC_011757  Mchl_4913  response regulator receiver modulated metal dependent phosphohydrolase  44.69 
 
 
354 aa  156  8e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.478904  normal  0.760596 
 
 
-
 
NC_011071  Smal_1828  response regulator receiver modulated metal dependent phosphohydrolase  39.59 
 
 
379 aa  156  9e-37  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.723665 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  38.42 
 
 
333 aa  156  9e-37  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_25160  response regulator  38.42 
 
 
356 aa  155  1e-36  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
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