More than 300 homologs were found in PanDaTox collection
for query gene Sfri_2755 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  75.34 
 
 
513 aa  800    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  76.94 
 
 
515 aa  826    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  75.73 
 
 
513 aa  804    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  100 
 
 
520 aa  1076    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  75.15 
 
 
513 aa  798    Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  75.34 
 
 
513 aa  800    Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_011138  MADE_01215  Response regulator  57.39 
 
 
509 aa  595  1e-169  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  46.09 
 
 
525 aa  473  1e-132  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_004347  SO_2366  response regulator  43.22 
 
 
525 aa  426  1e-118  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  42.33 
 
 
522 aa  419  1e-116  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  43.6 
 
 
523 aa  419  1e-116  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  43.6 
 
 
523 aa  419  1e-116  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  42.25 
 
 
518 aa  420  1e-116  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  43.4 
 
 
523 aa  418  9.999999999999999e-116  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  43.4 
 
 
523 aa  417  9.999999999999999e-116  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  43.4 
 
 
523 aa  417  9.999999999999999e-116  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  43.49 
 
 
524 aa  415  9.999999999999999e-116  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  41.65 
 
 
522 aa  413  1e-114  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  42.88 
 
 
525 aa  412  1e-114  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  43.11 
 
 
525 aa  410  1e-113  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  43.11 
 
 
525 aa  410  1e-113  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  41.87 
 
 
526 aa  406  1.0000000000000001e-112  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  41.63 
 
 
523 aa  404  1e-111  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  42.28 
 
 
521 aa  402  1e-111  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  43.4 
 
 
527 aa  397  1e-109  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 
523 aa  395  1e-109  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  40.98 
 
 
531 aa  390  1e-107  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  40.42 
 
 
536 aa  376  1e-103  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02571  response regulator  39.49 
 
 
521 aa  350  3e-95  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  38.31 
 
 
508 aa  349  6e-95  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  43.56 
 
 
437 aa  332  8e-90  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  35.92 
 
 
471 aa  313  3.9999999999999997e-84  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  36.9 
 
 
529 aa  311  2e-83  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  36.64 
 
 
531 aa  308  1.0000000000000001e-82  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  37.01 
 
 
517 aa  300  4e-80  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  33.4 
 
 
512 aa  278  2e-73  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  36.08 
 
 
432 aa  277  3e-73  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1101  response regulator receiver modulated metal dependent phosphohydrolase  32.07 
 
 
450 aa  233  9e-60  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  34.58 
 
 
580 aa  215  1.9999999999999998e-54  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  34.4 
 
 
581 aa  213  7e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  36.02 
 
 
578 aa  211  3e-53  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  34.4 
 
 
582 aa  210  5e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  36.13 
 
 
767 aa  209  1e-52  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.788805 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  35.14 
 
 
580 aa  208  2e-52  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_008709  Ping_0306  metal dependent phosphohydrolase  48.06 
 
 
361 aa  204  4e-51  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  37.12 
 
 
579 aa  203  6e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  35.02 
 
 
550 aa  199  7.999999999999999e-50  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  44.74 
 
 
348 aa  197  4.0000000000000005e-49  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_011313  VSAL_II0591  putative membrane associated signaling protein  48.04 
 
 
596 aa  196  6e-49  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  46.83 
 
 
331 aa  195  1e-48  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  45.19 
 
 
331 aa  194  3e-48  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  43.54 
 
 
328 aa  192  2e-47  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  43.54 
 
 
331 aa  190  7e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  43.19 
 
 
363 aa  188  2e-46  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  33.64 
 
 
593 aa  187  3e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  43.84 
 
 
360 aa  187  3e-46  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2117  histidine kinase  34.12 
 
 
631 aa  188  3e-46  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  43.27 
 
 
331 aa  187  4e-46  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  43.27 
 
 
331 aa  187  4e-46  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  42.79 
 
 
343 aa  185  2.0000000000000003e-45  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  47.31 
 
 
331 aa  185  2.0000000000000003e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  43.84 
 
 
367 aa  185  2.0000000000000003e-45  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  45.13 
 
 
338 aa  185  2.0000000000000003e-45  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  44.62 
 
 
338 aa  184  3e-45  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  44.62 
 
 
338 aa  184  3e-45  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  46.43 
 
 
353 aa  184  4.0000000000000006e-45  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  43.69 
 
 
350 aa  183  6e-45  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  42.86 
 
 
337 aa  183  6e-45  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  44.1 
 
 
338 aa  183  8.000000000000001e-45  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  33.02 
 
 
337 aa  182  1e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  42.16 
 
 
399 aa  182  1e-44  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.98 
 
 
746 aa  182  1e-44  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  39.67 
 
 
348 aa  182  1e-44  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  39.83 
 
 
340 aa  182  1e-44  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  45.73 
 
 
350 aa  181  2e-44  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  45.88 
 
 
362 aa  182  2e-44  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  42.31 
 
 
338 aa  181  2e-44  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  44.56 
 
 
328 aa  181  2e-44  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  36.18 
 
 
741 aa  181  2.9999999999999997e-44  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  38.78 
 
 
339 aa  180  4e-44  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  39.26 
 
 
348 aa  180  5.999999999999999e-44  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  34.49 
 
 
740 aa  180  7e-44  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  44.62 
 
 
352 aa  179  9e-44  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  45.56 
 
 
338 aa  178  3e-43  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  45.56 
 
 
338 aa  178  3e-43  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  45.56 
 
 
338 aa  178  3e-43  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2085  response regulator receiver modulated metal dependent phosphohydrolase  35.4 
 
 
345 aa  177  4e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.931733  normal  0.012958 
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  43.22 
 
 
268 aa  177  4e-43  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  41.51 
 
 
340 aa  177  4e-43  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  43.08 
 
 
339 aa  177  4e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  41.33 
 
 
354 aa  177  5e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  45.56 
 
 
338 aa  177  5e-43  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  42.56 
 
 
339 aa  176  6e-43  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_1828  response regulator receiver modulated metal dependent phosphohydrolase  45.36 
 
 
379 aa  176  8e-43  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.723665 
 
 
-
 
NC_011989  Avi_4319  Metal dependent phosphohydrolase with a response regulator receiver protein  47.4 
 
 
382 aa  176  9e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3287  response regulator receiver sensor signal transduction histidine kinase  34.56 
 
 
584 aa  175  9.999999999999999e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847642  normal 
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  31.76 
 
 
613 aa  176  9.999999999999999e-43  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2574  response regulator  44.06 
 
 
368 aa  175  1.9999999999999998e-42  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_013173  Dbac_2138  metal dependent phosphohydrolase  44.9 
 
 
606 aa  175  1.9999999999999998e-42  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.258694  n/a   
 
 
-
 
NC_009457  VC0395_A0913  hypothetical protein  40.72 
 
 
492 aa  174  2.9999999999999996e-42  Vibrio cholerae O395  Bacteria  normal  0.512089  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>