More than 300 homologs were found in PanDaTox collection
for query gene Ssed_1780 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  100 
 
 
525 aa  1089    Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  44.49 
 
 
513 aa  473  1e-132  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  46.84 
 
 
515 aa  474  1e-132  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  46.09 
 
 
520 aa  473  1e-132  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  44.29 
 
 
513 aa  470  1.0000000000000001e-131  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  44.29 
 
 
513 aa  469  1.0000000000000001e-131  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  44.29 
 
 
513 aa  470  1.0000000000000001e-131  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01215  Response regulator  43.65 
 
 
509 aa  432  1e-120  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  40.41 
 
 
522 aa  389  1e-107  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  38.49 
 
 
522 aa  376  1e-103  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  36.63 
 
 
518 aa  377  1e-103  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_004347  SO_2366  response regulator  38.83 
 
 
525 aa  368  1e-100  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  38.43 
 
 
523 aa  366  1e-100  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  38.43 
 
 
523 aa  366  1e-100  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  38.43 
 
 
523 aa  365  1e-99  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  38.43 
 
 
523 aa  365  1e-99  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  38.43 
 
 
523 aa  365  1e-99  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  39.03 
 
 
526 aa  363  3e-99  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  38.03 
 
 
525 aa  363  6e-99  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  38.03 
 
 
525 aa  363  6e-99  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  37.83 
 
 
521 aa  361  2e-98  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  37.09 
 
 
525 aa  360  2e-98  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  38.92 
 
 
527 aa  360  3e-98  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  37.63 
 
 
524 aa  357  2.9999999999999997e-97  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  36.66 
 
 
523 aa  355  1e-96  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  37.8 
 
 
523 aa  344  2.9999999999999997e-93  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  36.46 
 
 
531 aa  344  2.9999999999999997e-93  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  36.14 
 
 
536 aa  328  1.0000000000000001e-88  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  34.41 
 
 
508 aa  322  9.999999999999999e-87  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  36.23 
 
 
432 aa  311  2e-83  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02571  response regulator  33.2 
 
 
521 aa  293  4e-78  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  34.92 
 
 
471 aa  293  7e-78  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  38.31 
 
 
437 aa  292  1e-77  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  34.23 
 
 
512 aa  287  2.9999999999999996e-76  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  34.09 
 
 
531 aa  273  5.000000000000001e-72  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  32.99 
 
 
529 aa  268  2e-70  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  32.32 
 
 
517 aa  259  6e-68  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_009718  Fnod_1101  response regulator receiver modulated metal dependent phosphohydrolase  29.09 
 
 
450 aa  210  4e-53  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0306  metal dependent phosphohydrolase  44.91 
 
 
361 aa  199  1.0000000000000001e-49  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
338 aa  194  3e-48  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
338 aa  194  3e-48  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  36.3 
 
 
740 aa  192  1e-47  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  44 
 
 
338 aa  192  2e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  42.86 
 
 
338 aa  186  7e-46  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  41.5 
 
 
339 aa  186  7e-46  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  31.82 
 
 
581 aa  185  2.0000000000000003e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  42.29 
 
 
338 aa  182  1e-44  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  42.29 
 
 
338 aa  182  1e-44  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  39.34 
 
 
348 aa  182  1e-44  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  42.51 
 
 
340 aa  182  1e-44  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  42.29 
 
 
338 aa  182  1e-44  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  42.86 
 
 
338 aa  182  2e-44  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  41.87 
 
 
331 aa  180  7e-44  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  42.44 
 
 
328 aa  180  7e-44  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  37.27 
 
 
348 aa  179  9e-44  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  41.28 
 
 
339 aa  179  1e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  29.74 
 
 
582 aa  178  2e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  40 
 
 
338 aa  178  2e-43  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  30.23 
 
 
579 aa  178  2e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  32.83 
 
 
337 aa  177  6e-43  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  30.91 
 
 
580 aa  176  9e-43  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  29.67 
 
 
578 aa  176  9.999999999999999e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2117  histidine kinase  32.26 
 
 
631 aa  175  1.9999999999999998e-42  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  32.26 
 
 
593 aa  175  1.9999999999999998e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  40.49 
 
 
331 aa  174  2.9999999999999996e-42  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  38.43 
 
 
343 aa  174  3.9999999999999995e-42  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  31.35 
 
 
580 aa  174  5e-42  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  36.33 
 
 
741 aa  173  5.999999999999999e-42  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  40.72 
 
 
360 aa  173  6.999999999999999e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
331 aa  172  1e-41  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
331 aa  172  1e-41  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1828  response regulator receiver modulated metal dependent phosphohydrolase  43.69 
 
 
379 aa  172  1e-41  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.723665 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
331 aa  171  2e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  40.89 
 
 
328 aa  172  2e-41  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4003  response regulator  41.06 
 
 
357 aa  171  3e-41  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  40.45 
 
 
268 aa  171  4e-41  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  38.16 
 
 
354 aa  170  5e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.35 
 
 
746 aa  170  5e-41  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  39.91 
 
 
339 aa  170  6e-41  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  37.1 
 
 
367 aa  169  9e-41  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  40.72 
 
 
363 aa  169  1e-40  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  37.7 
 
 
350 aa  168  2.9999999999999998e-40  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4319  Metal dependent phosphohydrolase with a response regulator receiver protein  44.63 
 
 
382 aa  167  4e-40  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  39.41 
 
 
340 aa  167  5.9999999999999996e-40  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  39.8 
 
 
347 aa  167  5.9999999999999996e-40  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  39.51 
 
 
331 aa  166  8e-40  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0737  metal dependent phosphohydrolase  41.54 
 
 
254 aa  166  9e-40  Delftia acidovorans SPH-1  Bacteria  normal  0.752336  normal 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  38.6 
 
 
352 aa  166  1.0000000000000001e-39  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  37.79 
 
 
350 aa  166  1.0000000000000001e-39  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_013173  Dbac_2138  metal dependent phosphohydrolase  42.35 
 
 
606 aa  165  1.0000000000000001e-39  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.258694  n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  40.29 
 
 
337 aa  165  2.0000000000000002e-39  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_007575  Suden_1924  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  43.62 
 
 
367 aa  164  3e-39  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.620973  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  38.89 
 
 
399 aa  164  3e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  27.95 
 
 
550 aa  164  4.0000000000000004e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_25160  response regulator  38.05 
 
 
356 aa  164  4.0000000000000004e-39  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0051  metal dependent phosphohydrolase  36.14 
 
 
407 aa  164  5.0000000000000005e-39  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0591  putative membrane associated signaling protein  38.73 
 
 
596 aa  163  5.0000000000000005e-39  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  42.35 
 
 
362 aa  162  1e-38  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  39.09 
 
 
365 aa  162  1e-38  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3287  response regulator receiver sensor signal transduction histidine kinase  32.9 
 
 
584 aa  162  2e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847642  normal 
 
 
-
 
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