85 homologs were found in PanDaTox collection
for query gene Rru_A0131 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  100 
 
 		 337 aa  676    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  47.63 
 
 		 593 aa  253  3e-66  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_2117  histidine kinase  47.63 
 
 		 631 aa  253  4.0000000000000004e-66  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.0208634 
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  45.13 
 
 		 581 aa  248  9e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  44.18 
 
 		 579 aa  248  1e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  44.24 
 
 		 580 aa  245  9.999999999999999e-64  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  45.45 
 
 		 580 aa  243  1.9999999999999999e-63  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  44.81 
 
 		 582 aa  243  1.9999999999999999e-63  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  44.81 
 
 		 578 aa  243  3.9999999999999997e-63  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  45.19 
 
 		 613 aa  243  5e-63  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 		 517 aa  241  9e-63  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_011894  Mnod_1253  response regulator receiver sensor signal transduction histidine kinase  46.59 
 
 		 584 aa  238  2e-61  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  44.74 
 
 		 550 aa  237  2e-61  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  41.72 
 
 		 523 aa  236  3e-61  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  40.45 
 
 		 746 aa  231  2e-59  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  40 
 
 		 741 aa  226  3e-58  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  40.24 
 
 		 518 aa  224  2e-57  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal  1 
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  37.24 
 
 		 536 aa  222  6e-57  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  39.17 
 
 		 767 aa  221  9.999999999999999e-57  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.788805 
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  40.26 
 
 		 531 aa  220  3e-56  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  39.82 
 
 		 522 aa  219  3.9999999999999997e-56  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  40.4 
 
 		 529 aa  219  3.9999999999999997e-56  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  42.16 
 
 		 531 aa  219  7e-56  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_010511  M446_1996  response regulator receiver sensor signal transduction histidine kinase  46.45 
 
 		 584 aa  216  2.9999999999999998e-55  Methylobacterium sp. 4-46  Bacteria  normal  0.0327436  normal  0.170409 
 
 
-
 
NC_010505  Mrad2831_3287  response regulator receiver sensor signal transduction histidine kinase  45.24 
 
 		 584 aa  216  4e-55  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847642  normal  1 
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  36.74 
 
 		 740 aa  216  4e-55  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_011138  MADE_02571  response regulator  37.5 
 
 		 521 aa  214  9.999999999999999e-55  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  35.5 
 
 		 523 aa  209  6e-53  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  35.5 
 
 		 523 aa  209  6e-53  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  35.21 
 
 		 523 aa  209  8e-53  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  35.21 
 
 		 523 aa  208  9e-53  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  35.21 
 
 		 523 aa  208  9e-53  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_004347  SO_2366  response regulator  37.69 
 
 		 525 aa  207  2e-52  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  37.11 
 
 		 524 aa  207  2e-52  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  36.25 
 
 		 525 aa  207  3e-52  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  36.25 
 
 		 525 aa  207  3e-52  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  36.25 
 
 		 525 aa  206  5e-52  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  36.05 
 
 		 527 aa  202  5e-51  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  36.45 
 
 		 522 aa  199  7.999999999999999e-50  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  35.87 
 
 		 521 aa  197  2.0000000000000003e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_007643  Rru_A0659  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  43.2 
 
 		 766 aa  196  5.000000000000001e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_1361  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  37.37 
 
 		 746 aa  193  3e-48  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_3810  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.12 
 
 		 763 aa  191  1e-47  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A0553  response regulator receiver Signal transduction histidine kinase  52.97 
 
 		 440 aa  189  4e-47  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.580246  n/a   
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  34.8 
 
 		 526 aa  189  5e-47  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal  1 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  34.92 
 
 		 523 aa  186  4e-46  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal  1 
 
 
-
 
NC_011138  MADE_01215  Response regulator  35.26 
 
 		 509 aa  186  7e-46  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_009052  Sbal_3403  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.64 
 
 		 744 aa  183  4.0000000000000006e-45  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0933  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.64 
 
 		 744 aa  182  5.0000000000000004e-45  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  33.02 
 
 		 520 aa  182  6e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  33.01 
 
 		 515 aa  182  8.000000000000001e-45  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0959  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.64 
 
 		 744 aa  181  1e-44  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_3036  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  37.81 
 
 		 758 aa  181  1e-44  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.830853 
 
 
-
 
NC_009997  Sbal195_0967  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.64 
 
 		 744 aa  182  1e-44  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_0868  diguanylate cyclase/phosphodiesterase  35.35 
 
 		 743 aa  179  4.999999999999999e-44  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  34.89 
 
 		 513 aa  178  9e-44  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  34.89 
 
 		 513 aa  178  9e-44  Shewanella baltica OS195  Bacteria  normal  1  normal  0.152382 
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  34.89 
 
 		 513 aa  178  1e-43  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  34.89 
 
 		 513 aa  177  2e-43  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  32.83 
 
 		 525 aa  177  3e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal  1 
 
 
-
 
NC_008751  Dvul_0402  response regulator receiver sensor signal transduction histidine kinase  49.2 
 
 		 398 aa  175  9e-43  Desulfovibrio vulgaris DP4  Bacteria  normal  0.93747  normal  0.145713 
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  35.58 
 
 		 512 aa  172  6.999999999999999e-42  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_007643  Rru_A1908  response regulator receiver modulated diguanylate cyclase  51.58 
 
 		 519 aa  171  2e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.11693  n/a   
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  35.77 
 
 		 437 aa  169  7e-41  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  35.16 
 
 		 508 aa  166  4e-40  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  47.71 
 
 		 471 aa  158  2e-37  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_2880  multi-sensor signal transduction histidine kinase  46.49 
 
 		 576 aa  153  4e-36  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  47.26 
 
 		 432 aa  148  1.0000000000000001e-34  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_4383  response regulator receiver modulated diguanylate phosphodiesterase  32.31 
 
 		 733 aa  147  3e-34  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_2925  diguanylate cyclase/phosphodiesterase / diguanylate cyclase  32.16 
 
 		 743 aa  145  8.000000000000001e-34  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.249336 
 
 
-
 
NC_008576  Mmc1_0401  response regulator receiver sensor signal transduction histidine kinase  44.59 
 
 		 415 aa  138  2e-31  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.653943 
 
 
-
 
NC_007519  Dde_0239  PAS/PAC sensor hybrid histidine kinase  44.57 
 
 		 565 aa  137  2e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_4124  response regulator receiver protein  39.39 
 
 		 172 aa  112  1.0000000000000001e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007901  Rfer_4413  response regulator receiver sensor signal transduction histidine kinase  29.05 
 
 		 565 aa  110  4.0000000000000004e-23  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_1101  response regulator receiver modulated metal dependent phosphohydrolase  28.36 
 
 		 450 aa  72.4  0.00000000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_0118  PAS/PAC sensor hybrid histidine kinase  26.03 
 
 		 1927 aa  60.5  0.00000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.125924 
 
 
-
 
NC_009438  Sputcn32_1996  response regulator receiver protein  39.62 
 
 		 78 aa  51.2  0.00003  Shewanella putrefaciens CN-32  Bacteria  normal  0.0387596  n/a   
 
 
-
 
NC_011662  Tmz1t_1352  response regulator receiver protein  35.34 
 
 		 410 aa  44.3  0.003  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_3909  DNA-binding transcriptional activator DcuR  36.36 
 
 		 240 aa  44.7  0.003  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1378  response regulator receiver modulated metal dependent phosphohydrolase  28.68 
 
 		 506 aa  43.9  0.004  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000458361  n/a   
 
 
-
 
NC_007413  Ava_0064  Signal transduction histidine kinase  27.27 
 
 		 1714 aa  43.1  0.006  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.274411 
 
 
-
 
NC_008254  Meso_2142  two component transcriptional regulator  40.7 
 
 		 240 aa  43.1  0.008  Chelativorans sp. BNC1  Bacteria  normal  0.46457  n/a   
 
 
-
 
NC_011729  PCC7424_2350  putative PAS/PAC sensor protein  26.32 
 
 		 450 aa  42.7  0.008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_012912  Dd1591_4101  DNA-binding transcriptional activator DcuR  35.23 
 
 		 240 aa  43.1  0.008  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_6442  multi-sensor hybrid histidine kinase  34.48 
 
 		 688 aa  42.7  0.009  Methylobacterium sp. 4-46  Bacteria  normal  0.381857  normal  1 
 
 
-
 
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