| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1019 |
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| Symbol | |
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| ID | 5134699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 998935 |
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| End bp | 1000503 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640531341 |
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| Product | putative response regulator |
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| Protein accession | YP_001215855 |
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| Protein GI | 147671934 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGTGGT TTAAATATGG AGATGGCATG GATCTGTTTG CAGATATGCG CCAAGAGGCC
GCAGGGGAAA AAGAACGGGT AGTCATGCAT AGCCAAGAGC CTTGGTGTGT GTTGTTAGTC
GATGATGATG AGCAGATGCA CCAAATCACA CGTTTAGCAT TGACGGGGTT CAAGTTTCAA
AATCGTCCCC TTGAATTAAT TTCGGTTCTT TCTGGCCTAG AAGCGCGAAA AGTGATGGCG
GAGCGCTCGG ATATCGCACT GGCGCTGGTT GATGTAGTGA TGGAAACCGA ACACGCGGGC
TTAGACTTGG TGCGTTACAT CCGCGAAGAA CTCCAGAACC GTCAAGTGCG TTTAGTGCTG
CGCACCGGAC AAGCAGGGCA GGCTCCTGAA GATAGGGTCA TCAAAGAGTA TGAGATTGAT
GATTACAAAG AAAAAACAGA GTTGACGACT CAAAAACTGC GCACCTTGCT CTATTCTATG
CTGCGTGCTT ACCGAGATTT GTGCTTGATT GAAGATCAGA AGCTCGGTTT AAGTCATGTG
ATTGAAGCCT CTGCGAATGT TCAAAATACG AAAAGTCTCC AGTCTTACGC TACTGCGGTT
TTGAACCAAT TGACTTCATT GCTGAAATTG CACGCTTCAG CTTTTTATTG CGTGGCGACA
CCTTGTCCCG ATAGTGAAAA ATGTAACGCT TTAACCGTGG CAACAACTGC TGAACGGGTT
GAGTTATACG TTGAATCTCC CTTTAAAGGT TTACCGGAAG ACGTGCAGCG TCGTTGCAAA
GAAGTGTTGA GTCAGCGCAC GACTCGCGAC TACGGCGATG CTTACGTGTT CTTTAAACAA
GATGAACGAG GTGTTGATAG CGTTCTGTAT GTAGGTTTTG AGCAGGAGCT TTCTGAACTG
GATAGAAAAT TGCTTGAGAT CTACATGTAC AACATCGGTC TTACCTTTGA AAACATTAAC
TTGATGGTGG ACTTGCGTGA GACGTCGAAA GAGTTGGTAT ACAACTTAGC CAATGCCGTG
GAAGCACGTA GCCGAGAAAC CGGCGCACAT GTACAACGTG TTGCCTTGTA TTGTGAGCGA
TTAGCCCATT TATACGGTTT AGCTGAATCT GAGGCTGACA TGATCAAAAA TGCCTCACCT
TTGCATGATG TTGGCAAAGT CGCCATTCCA GACAGTATCT TGCATAAGCC TGGTAAACTT
GATGCCCAAG AATGGGCGAT CATGCAAAAG CATGTGGAGT ATGGGGTCGA AATCCTTAAC
CGTTCTAAAC GGCGATTAAT GCAAGTGGCG AAAGAAATTG CCGCCACTCA TCATGAAAAA
TGGGATGGCA GTGGTTATCC GAACCGCTTA CAAGGCGATG ATATTCCCAT TTCAGGCCGT
ATTACTGCGA TAGCCGATGT CTTTGATGCT TTAGGCGCGA AACGTTCTTA TAAAGATCCG
TGGACAGATG AACAGATCCG AGAAGAGTTA ATGGCGCAAA AAGGGCGTCA CTTTGAGCCG
AAACTGGTTG AGCTATTACT CGAACACTGG GATGAGTTTA TTGCTATCCG TGCTTCGCTG
CCTGACTAG
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| Protein sequence | MKWFKYGDGM DLFADMRQEA AGEKERVVMH SQEPWCVLLV DDDEQMHQIT RLALTGFKFQ
NRPLELISVL SGLEARKVMA ERSDIALALV DVVMETEHAG LDLVRYIREE LQNRQVRLVL
RTGQAGQAPE DRVIKEYEID DYKEKTELTT QKLRTLLYSM LRAYRDLCLI EDQKLGLSHV
IEASANVQNT KSLQSYATAV LNQLTSLLKL HASAFYCVAT PCPDSEKCNA LTVATTAERV
ELYVESPFKG LPEDVQRRCK EVLSQRTTRD YGDAYVFFKQ DERGVDSVLY VGFEQELSEL
DRKLLEIYMY NIGLTFENIN LMVDLRETSK ELVYNLANAV EARSRETGAH VQRVALYCER
LAHLYGLAES EADMIKNASP LHDVGKVAIP DSILHKPGKL DAQEWAIMQK HVEYGVEILN
RSKRRLMQVA KEIAATHHEK WDGSGYPNRL QGDDIPISGR ITAIADVFDA LGAKRSYKDP
WTDEQIREEL MAQKGRHFEP KLVELLLEHW DEFIAIRASL PD
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