| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3036 |
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| Symbol | |
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| ID | 5748620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3339191 |
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| End bp | 3341467 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298139 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001564059 |
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| Protein GI | 160898477 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.830853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCG TGATGCGCGC ACGGGCGCCC AGGGCGCCCG CCCCTGCTTC CGCCCTCCTG
CAGCCGGCTC TGCAGCCGCC CCCGCCATCG CCCGTGCCCG GGCCTGAATG GCGGGTGCTG
ATCGTGGACA GCGACCCCGA CGTACACGCC GCCTTCCGCC TGGCGCTGGA AGGCCACAGC
CTGTTCGGCC GGCCGCTGGT GTTCCTCTAC GCCCGCTCCG GCACGCAGGC GCGCAACCTG
CTGCGCAGCG AGCAGGACCT GGCCGTGGTG GTGCTCGACG CCGTGACCGA TGGCACGGGC
GCCGGGCTGG ACCTGGTGGA CTTCATCCGC TACACGGCCG GCCTGCGCAA CAGCCGCATC
GTGCTGCGCA CCGGCCGCCC GGGCCAGGCG CCCGATCTGG AAACCCTGCT GCGCTACGAC
ATCAACGACT GCCGCACCAA GACCGAACTC ACGCCCGACC GGCTGCTGGC CATCGTGGTG
ACCGCCGTGC GCTCCTACGA GCAGCTGTGC GCCATCGAGG CCAACCGCCG CAGCCTGGAG
CTGATGGTGC GCTCCAGCGC CTCGCTGCTG GAGGAAACCA ATCTGCACGC CTTCGCGCGG
GGCGTGATCA CCCAGCTGGC CACCTTGCTG GGCGTGGCCA GTGAAGGACT GGTCTGCTCG
GAGGGCACGC ACCCGGCCGA GCCCTACCGC GTGCTCGCGG CCACGGGACC GTTCGCCCGG
CTCATCGACC AGCCCATCGC CACCGTGCTG GCCTCACGCG GGCTGCGCCT GCTGCGCCAG
GCGCTGCAGG CGCGGCGCAA CATCTACGGC GTGCAGCGCG GCGTGGCGCT GTACATCGGC
CGGGGCGACG AGCAGGACAT GGCCGTCTTC ATAGACGCGC CAGCCTCGCA CAGCGCACTG
GACCGCCAAC TGCTCGAAGT CTTCTGCGCC AACCTGCGCA CGCTGCTGCA CAACCGCGGC
CTGCTGGAGC GCCTGCACCA GTCCGCCTAC TTCGACCCGC TGGTCTGCCT GCCCAACCGC
GCCCACTTCG TGGAAAAAGT GGACGAATGC GTGTGGCGCG GCACGCGTGA CCATGTGCTG
GCCCTGGTGG ACATCGACGA CTTCAGCGCC ACCAACGACG TGATGGGCCA CCGCTTTGGC
GACCGCCTGC TCGAAGCCAT GGCCCGCCGC TTGGCCAGCG CCCTGCCCGC AGGCGTGCTG
CTGGCGCGCG TGGGATCGGA CACCTTCGGC ATCCTGGGCC CCACCGACGA GGTGGCCCTG
GCCCAGTTGC TGGACTGCGC CCGCCAGCCC CTGGCCGTGG ACGGCGTGCC GCACAAGGTC
TCGCTGACCT GCGGCTACGT GTACCTGCCC CATGAACGCC AGGCCGGCAC CGACCTGGTC
AAGGACGCCA CCATCGCCCT CAAGCGCGCC AAGCGCGATC ACCGCGGCCA GCTGCTGGAG
TACTCCGAGC AGATGGGCAT GGAGGCGCGC GACCGCGCCC TGCTGCTGTC CGACCTGCGC
GCCGCCATCG ACGGCGCCCA GCTTTTCCTG GTCTACCAGC CCCAGGTGGA CCTGGAAACC
CATGCCCTGG TCGGCCTGGA GGCCCTGCTG CGCTGGCGCC GGCAGGACGG CAGCTTCGTG
CCGCCCGACC GCTTCATTCC GGTGGCCGAG CATTCGGGCC TCATCGTGCC GCTGGGCCAA
TGGGTGCTGG CCACGGCCTG CCGCACCATG CGCGAACTGC TGGACGCCGG CCGCGCCCCC
AGGCGCATGG CCGTCAATGT CTCCACCGTG CAGTTGCAGG ACCCGGGCTT TCTGCAGACC
GTGAGCAACG CCCTGGCAGA GCACGGCCTG CAGGGCGCGC AGCTGGAGCT GGAGATCACC
GAATCCGTCG CGGTCCTGCC CACCCAGCTG CTGCAGGCCA CGCTCAGCGC CCTGCGCACG
CTGGGCGTGA CCATTGCCAT CGACGACTTC GGCACCGGCT ACTCCTCCCT GAGCTACCTG
GAGCGCCTGC CGCTGGACCG CATCAAGATC GACCGCAGCT TCGTGCGCCA GCTTGGCGAA
TCACAGGAAG CCCGCATCGC CGAAATGATC GCCCAGCTGG GCCGCAAGCT CGGCCTGCAG
GTCCTGGCCG AAGGCATAGA GGACGCCAGC GCCTGGCAGG CCCTGCGCGC CATGGGCTGC
CAGGAGGGAC AGGGCTATCA CGTTGCCCGG CCGATGGACA AGGCGCAGTT GCTGGGCTGG
CTGGGCCAGC GCAATGAAGT GCCTCAGCGA CAGCCTGGCA CCTCTGAGTT CCCCTGA
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| Protein sequence | MSFVMRARAP RAPAPASALL QPALQPPPPS PVPGPEWRVL IVDSDPDVHA AFRLALEGHS
LFGRPLVFLY ARSGTQARNL LRSEQDLAVV VLDAVTDGTG AGLDLVDFIR YTAGLRNSRI
VLRTGRPGQA PDLETLLRYD INDCRTKTEL TPDRLLAIVV TAVRSYEQLC AIEANRRSLE
LMVRSSASLL EETNLHAFAR GVITQLATLL GVASEGLVCS EGTHPAEPYR VLAATGPFAR
LIDQPIATVL ASRGLRLLRQ ALQARRNIYG VQRGVALYIG RGDEQDMAVF IDAPASHSAL
DRQLLEVFCA NLRTLLHNRG LLERLHQSAY FDPLVCLPNR AHFVEKVDEC VWRGTRDHVL
ALVDIDDFSA TNDVMGHRFG DRLLEAMARR LASALPAGVL LARVGSDTFG ILGPTDEVAL
AQLLDCARQP LAVDGVPHKV SLTCGYVYLP HERQAGTDLV KDATIALKRA KRDHRGQLLE
YSEQMGMEAR DRALLLSDLR AAIDGAQLFL VYQPQVDLET HALVGLEALL RWRRQDGSFV
PPDRFIPVAE HSGLIVPLGQ WVLATACRTM RELLDAGRAP RRMAVNVSTV QLQDPGFLQT
VSNALAEHGL QGAQLELEIT ESVAVLPTQL LQATLSALRT LGVTIAIDDF GTGYSSLSYL
ERLPLDRIKI DRSFVRQLGE SQEARIAEMI AQLGRKLGLQ VLAEGIEDAS AWQALRAMGC
QEGQGYHVAR PMDKAQLLGW LGQRNEVPQR QPGTSEFP
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