109 homologs were found in PanDaTox collection
for query gene PCC7424_4124 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_4124  response regulator receiver protein  100 
 
 
172 aa  349  1e-95  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011138  MADE_02571  response regulator  52.67 
 
 
521 aa  144  5e-34  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  51.91 
 
 
517 aa  140  9.999999999999999e-33  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  42.94 
 
 
515 aa  137  7e-32  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01215  Response regulator  45.1 
 
 
509 aa  134  6.0000000000000005e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  44.06 
 
 
520 aa  131  6e-30  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0401  response regulator receiver sensor signal transduction histidine kinase  40.13 
 
 
415 aa  130  1.0000000000000001e-29  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.653943 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  45.19 
 
 
579 aa  129  1.0000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  44.7 
 
 
580 aa  129  2.0000000000000002e-29  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  47.01 
 
 
525 aa  129  2.0000000000000002e-29  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  47.01 
 
 
525 aa  129  2.0000000000000002e-29  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  47.01 
 
 
525 aa  129  2.0000000000000002e-29  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  44.29 
 
 
581 aa  129  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  44.44 
 
 
582 aa  128  5.0000000000000004e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  44.06 
 
 
524 aa  127  5.0000000000000004e-29  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  42.76 
 
 
526 aa  127  6e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  45.45 
 
 
523 aa  127  8.000000000000001e-29  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  45.45 
 
 
523 aa  127  8.000000000000001e-29  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  45.45 
 
 
523 aa  127  8.000000000000001e-29  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  45.45 
 
 
523 aa  127  8.000000000000001e-29  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  45.45 
 
 
523 aa  127  9.000000000000001e-29  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  49.25 
 
 
740 aa  126  1.0000000000000001e-28  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  45.45 
 
 
578 aa  126  2.0000000000000002e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  44.44 
 
 
580 aa  125  3e-28  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  42.76 
 
 
521 aa  125  4.0000000000000003e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  46.56 
 
 
527 aa  124  7e-28  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  47.33 
 
 
522 aa  124  9e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_004347  SO_2366  response regulator  44.36 
 
 
525 aa  123  1e-27  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  43.97 
 
 
531 aa  123  1e-27  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_010172  Mext_2117  histidine kinase  43.7 
 
 
631 aa  123  1e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  43.7 
 
 
593 aa  122  3e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  40.56 
 
 
523 aa  121  4e-27  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  44.27 
 
 
513 aa  121  5e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  44.27 
 
 
513 aa  121  5e-27  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  44.27 
 
 
513 aa  120  6e-27  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  44.78 
 
 
767 aa  120  9.999999999999999e-27  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.788805 
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  45.8 
 
 
529 aa  120  9.999999999999999e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  44.53 
 
 
550 aa  119  1.9999999999999998e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  43.51 
 
 
513 aa  119  1.9999999999999998e-26  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  40.74 
 
 
613 aa  119  3e-26  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  43.18 
 
 
432 aa  118  3.9999999999999996e-26  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0553  response regulator receiver Signal transduction histidine kinase  41.55 
 
 
440 aa  117  7e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.580246  n/a   
 
 
-
 
NC_008751  Dvul_0402  response regulator receiver sensor signal transduction histidine kinase  35.4 
 
 
398 aa  117  7.999999999999999e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.93747  normal  0.145713 
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  42.75 
 
 
531 aa  115  1.9999999999999998e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  41.04 
 
 
518 aa  115  3e-25  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  40.82 
 
 
536 aa  115  3e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  37.16 
 
 
512 aa  114  6e-25  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  42.76 
 
 
523 aa  114  7.999999999999999e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  41.55 
 
 
746 aa  112  3e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  39.39 
 
 
337 aa  112  4.0000000000000004e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  34.69 
 
 
508 aa  111  6e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  40.15 
 
 
522 aa  110  9e-24  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1908  response regulator receiver modulated diguanylate cyclase  39.22 
 
 
519 aa  110  1.0000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.11693  n/a   
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  41.22 
 
 
525 aa  109  1.0000000000000001e-23  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  39.58 
 
 
471 aa  109  2.0000000000000002e-23  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  43.07 
 
 
741 aa  107  6e-23  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3287  response regulator receiver sensor signal transduction histidine kinase  39.26 
 
 
584 aa  98.6  4e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847642  normal 
 
 
-
 
NC_007912  Sde_3810  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  38.51 
 
 
763 aa  97.4  8e-20  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1253  response regulator receiver sensor signal transduction histidine kinase  39.02 
 
 
584 aa  97.1  1e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0659  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  36.31 
 
 
766 aa  96.7  2e-19  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2880  multi-sensor signal transduction histidine kinase  34.59 
 
 
576 aa  95.1  5e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_1361  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  33.96 
 
 
746 aa  93.2  1e-18  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1996  response regulator receiver sensor signal transduction histidine kinase  38.1 
 
 
584 aa  89.4  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.0327436  normal  0.170409 
 
 
-
 
NC_008577  Shewana3_0868  diguanylate cyclase/phosphodiesterase  36.3 
 
 
743 aa  89  3e-17  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0239  PAS/PAC sensor hybrid histidine kinase  34.85 
 
 
565 aa  87.8  7e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4383  response regulator receiver modulated diguanylate phosphodiesterase  35.88 
 
 
733 aa  87  1e-16  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0959  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.97 
 
 
744 aa  86.3  2e-16  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3036  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.61 
 
 
758 aa  84.7  6e-16  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.830853 
 
 
-
 
NC_009052  Sbal_3403  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.97 
 
 
744 aa  84.3  8e-16  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0933  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.97 
 
 
744 aa  84  8e-16  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0967  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.25 
 
 
744 aa  81.3  0.000000000000006  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  44.44 
 
 
437 aa  75.5  0.0000000000003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2925  diguanylate cyclase/phosphodiesterase / diguanylate cyclase  29.79 
 
 
743 aa  62.8  0.000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.249336 
 
 
-
 
NC_009438  Sputcn32_1996  response regulator receiver protein  39.44 
 
 
78 aa  60.1  0.00000001  Shewanella putrefaciens CN-32  Bacteria  normal  0.0387596  n/a   
 
 
-
 
NC_009718  Fnod_1101  response regulator receiver modulated metal dependent phosphohydrolase  28.24 
 
 
450 aa  60.8  0.00000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007901  Rfer_4413  response regulator receiver sensor signal transduction histidine kinase  28.03 
 
 
565 aa  54.7  0.0000006  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_0118  PAS/PAC sensor hybrid histidine kinase  24.24 
 
 
1927 aa  52.4  0.000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.125924 
 
 
-
 
NC_008530  LGAS_1735  DNA-binding response regulator  33.64 
 
 
228 aa  49.3  0.00003  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_1472  response regulator receiver domain-containing protein  29.57 
 
 
216 aa  48.5  0.00004  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_4024  DNA-binding response regulator  33.03 
 
 
245 aa  47.8  0.00008  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A4102  DNA-binding response regulator  33.03 
 
 
239 aa  47.8  0.00008  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0131  two component transcriptional regulator  33.03 
 
 
245 aa  47.8  0.00008  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.364585  n/a   
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  31.03 
 
 
230 aa  47  0.0001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_008531  LEUM_0351  DNA-binding response regulator  40.54 
 
 
230 aa  46.2  0.0002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2185  response regulator receiver  34.26 
 
 
356 aa  45.1  0.0004  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008528  OEOE_0119  DNA-binding response regulator  40.54 
 
 
230 aa  45.1  0.0004  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5596  two component transcriptional regulator, winged helix family  31.19 
 
 
235 aa  43.9  0.001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  30.63 
 
 
225 aa  43.1  0.002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  29.86 
 
 
144 aa  43.1  0.002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  33.61 
 
 
231 aa  42.7  0.003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.312171 
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  33.61 
 
 
231 aa  42.4  0.003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  33.88 
 
 
229 aa  42.4  0.003  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.179681 
 
 
-
 
NC_011071  Smal_1735  response regulator receiver protein  24.73 
 
 
119 aa  42.4  0.003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.419682 
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  35.48 
 
 
455 aa  42  0.004  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_014151  Cfla_3340  two component transcriptional regulator, winged helix family  29.51 
 
 
258 aa  42  0.004  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0454745 
 
 
-
 
NC_007413  Ava_1005  multi-sensor Signal transduction histidine kinase  26.21 
 
 
646 aa  41.6  0.005  Anabaena variabilis ATCC 29413  Bacteria  normal  0.442988  decreased coverage  0.0000217029 
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  32.77 
 
 
230 aa  41.6  0.005  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  32.77 
 
 
230 aa  41.6  0.005  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal 
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  32.77 
 
 
230 aa  41.6  0.005  Mycobacterium sp. JLS  Bacteria  normal  normal  0.354926 
 
 
-
 
NC_011126  HY04AAS1_1332  two component, sigma54 specific, transcriptional regulator, Fis family  31.52 
 
 
439 aa  42  0.005  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
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