More than 300 homologs were found in PanDaTox collection
for query gene Ssed_2209 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_2366  response regulator  76.34 
 
 
525 aa  838    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  78.02 
 
 
437 aa  664    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  77.39 
 
 
523 aa  846    Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  100 
 
 
526 aa  1078    Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  80.69 
 
 
523 aa  861    Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  77.97 
 
 
523 aa  848    Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  65.56 
 
 
527 aa  709    Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  76.15 
 
 
525 aa  827    Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  76.15 
 
 
525 aa  827    Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  77.39 
 
 
523 aa  846    Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  77.97 
 
 
523 aa  849    Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  77.78 
 
 
523 aa  847    Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  75.19 
 
 
525 aa  826    Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  82.15 
 
 
521 aa  905    Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  75.82 
 
 
524 aa  843    Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  46.71 
 
 
523 aa  491  1e-137  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  43.5 
 
 
522 aa  462  1e-129  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  44.6 
 
 
518 aa  457  1e-127  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_011138  MADE_02571  response regulator  42.03 
 
 
521 aa  417  9.999999999999999e-116  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  41.37 
 
 
531 aa  414  1e-114  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  41.43 
 
 
513 aa  410  1e-113  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  41.63 
 
 
513 aa  412  1e-113  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  41.63 
 
 
513 aa  412  1e-113  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  41.63 
 
 
513 aa  411  1e-113  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  41.87 
 
 
520 aa  406  1.0000000000000001e-112  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  43.31 
 
 
536 aa  405  1e-111  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01215  Response regulator  43 
 
 
509 aa  401  9.999999999999999e-111  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  40.66 
 
 
515 aa  402  9.999999999999999e-111  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  39.45 
 
 
522 aa  395  1e-108  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  39.77 
 
 
508 aa  375  1e-102  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  38.23 
 
 
517 aa  374  1e-102  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  39.03 
 
 
525 aa  363  3e-99  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  37.27 
 
 
512 aa  335  1e-90  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  36.51 
 
 
471 aa  317  4e-85  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  36.42 
 
 
529 aa  314  2.9999999999999996e-84  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  36.92 
 
 
531 aa  303  4.0000000000000003e-81  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  36.73 
 
 
432 aa  302  9e-81  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1101  response regulator receiver modulated metal dependent phosphohydrolase  30.64 
 
 
450 aa  254  3e-66  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  35.59 
 
 
578 aa  244  3e-63  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  35.49 
 
 
579 aa  239  8e-62  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  34.16 
 
 
582 aa  234  2.0000000000000002e-60  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  34.07 
 
 
580 aa  231  2e-59  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_008709  Ping_0306  metal dependent phosphohydrolase  50.74 
 
 
361 aa  231  2e-59  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  33.7 
 
 
580 aa  228  2e-58  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  32.69 
 
 
581 aa  223  7e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  39.81 
 
 
741 aa  222  9.999999999999999e-57  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  49 
 
 
368 aa  219  1e-55  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  34.13 
 
 
550 aa  218  2e-55  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1924  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  50.51 
 
 
367 aa  218  2.9999999999999998e-55  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.620973  n/a   
 
 
-
 
NC_013173  Dbac_2138  metal dependent phosphohydrolase  48.37 
 
 
606 aa  215  9.999999999999999e-55  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.258694  n/a   
 
 
-
 
NC_010172  Mext_2117  histidine kinase  38.28 
 
 
631 aa  213  4.9999999999999996e-54  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  38.28 
 
 
593 aa  213  7.999999999999999e-54  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  36.02 
 
 
613 aa  206  9e-52  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2574  response regulator  44.78 
 
 
368 aa  202  9.999999999999999e-51  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  49.24 
 
 
339 aa  201  1.9999999999999998e-50  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3287  response regulator receiver sensor signal transduction histidine kinase  36.42 
 
 
584 aa  201  3e-50  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847642  normal 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  48.51 
 
 
339 aa  199  9e-50  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  44.88 
 
 
331 aa  199  1.0000000000000001e-49  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  44.88 
 
 
331 aa  199  1.0000000000000001e-49  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  50.26 
 
 
350 aa  198  2.0000000000000003e-49  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  47.26 
 
 
354 aa  198  2.0000000000000003e-49  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  47.74 
 
 
340 aa  197  4.0000000000000005e-49  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  44.88 
 
 
331 aa  197  4.0000000000000005e-49  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  34.27 
 
 
767 aa  197  4.0000000000000005e-49  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.788805 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  46.73 
 
 
343 aa  197  5.000000000000001e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  45.54 
 
 
350 aa  195  1e-48  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  50.27 
 
 
338 aa  194  3e-48  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  34.63 
 
 
740 aa  193  6e-48  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  47.47 
 
 
340 aa  193  8e-48  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  46.77 
 
 
379 aa  192  1e-47  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_011894  Mnod_1253  response regulator receiver sensor signal transduction histidine kinase  35.36 
 
 
584 aa  191  2e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  42.18 
 
 
367 aa  191  2.9999999999999997e-47  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  41.87 
 
 
363 aa  191  2.9999999999999997e-47  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  49.19 
 
 
339 aa  190  4e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  50.27 
 
 
338 aa  191  4e-47  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  46.7 
 
 
338 aa  191  4e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  50.27 
 
 
338 aa  190  5.999999999999999e-47  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  50.27 
 
 
338 aa  190  5.999999999999999e-47  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  50.27 
 
 
338 aa  190  5.999999999999999e-47  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  44.17 
 
 
331 aa  189  7e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  43.9 
 
 
356 aa  189  8e-47  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  49.19 
 
 
338 aa  189  8e-47  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  49.19 
 
 
338 aa  189  8e-47  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  34.8 
 
 
337 aa  189  9e-47  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  46.91 
 
 
338 aa  189  1e-46  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.69 
 
 
746 aa  189  1e-46  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  42.93 
 
 
331 aa  188  2e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1996  response regulator receiver sensor signal transduction histidine kinase  36.42 
 
 
584 aa  188  2e-46  Methylobacterium sp. 4-46  Bacteria  normal  0.0327436  normal  0.170409 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  45.36 
 
 
348 aa  188  3e-46  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  45.15 
 
 
328 aa  187  5e-46  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  44.44 
 
 
363 aa  186  8e-46  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  47.28 
 
 
333 aa  185  1.0000000000000001e-45  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  44.28 
 
 
344 aa  185  2.0000000000000003e-45  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  47.26 
 
 
352 aa  184  3e-45  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4003  response regulator  46.56 
 
 
357 aa  184  3e-45  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  44.5 
 
 
268 aa  184  4.0000000000000006e-45  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  43.55 
 
 
359 aa  181  2e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0659  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.5 
 
 
766 aa  181  2.9999999999999997e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  42.79 
 
 
347 aa  181  2.9999999999999997e-44  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_011313  VSAL_II0591  putative membrane associated signaling protein  42.65 
 
 
596 aa  181  2.9999999999999997e-44  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>