| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2004 |
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| Symbol | |
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| ID | 4252577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2389151 |
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| End bp | 2390728 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118617 |
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| Product | response regulator receiver modulated metal dependent phosphohydrolase |
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| Protein accession | YP_734134 |
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| Protein GI | 113970341 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0562345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000282251 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGATTG ATCTTACAAA CAAAAAGCCG TTGTTCTCCA CTAAGAAAAC CACTGAAACA
TCTACCTCTG GGAGCCCTTG GAAGATCCTT GTTGTCGATG ATGAGCCCGA TGTCCATACC
GTGACAAAAC TCGCCCTTTC CCGTTTTCGA CTCGATGGCC GTGCCCTCAC CTTTATTAAT
GCTTACAGTG GCGAACAGGC AAAGGAGCTG CTCGCCAATG AACAAGATAT TGCCGTTGCT
TTTATCGATG TTGTCATGGA AAGCGACCAT GCGGGGCTCG AGCTGGTGAA ATGGATCCGT
GAAGTGCAAG TAAACAAAAA TATTAGACTG ATTTTACGTA CCGGTCAGCC CGGACAAGCC
CCCGAAGAAG ATGTGATAGT TAATTACGAT ATCAATGATT ACAAAGCAAA ATCGGAGCTA
GATTCCCGCA AACTGATGAC CAGCGTCTAC TCTGCCCTGC GCTCCTATCG CGATATTATG
GAAATAGAGC AAGCAAGACG AACACAGGTT AATCATCGTA AGGGTTTAGA GCGTGTGCTT
GAGGCCACCT CGGGCTTATT TGAACTCAGG ACCTTACATA GATTTGCTGA TGGCCTATTA
ACCCAGGTCG CCACCTTGCT TAATCTTGAT ACCGAGACCC TACTGCTGAC CTGCAATGCG
ATGGATGCTA TCAGTGGCCA TGTAGATTCA GCCGAAATTG AAATCTTGGC GGGCACGGGA
CAGTTTGCTA ATAGCCCTCC ACATAAGGAT TTACCTGAGC ATATCAGCAA GCTACTGCGT
AGTGCGTTAA TGCAAAAGCG CTGTTTGTAC GAAGATAATT GTTTTGTTGG TTATTTTCCG
ACAAAGAGTG GCCTTATTAA TCTGCTCTAT ATGGATGGTA TTGATAAGAT AGATGATTTG
GACAAAAAGC TTGTCGATAT TTTTGCAATA AATGTGGGGG TTGCCTTTGA AAATCTGCTC
CTTAATCAGG AGGTCGAAGA TACTCAATCT GAACTGATCC TGCGCTTGGG AGATGTGGTT
GAAAGTCGCT CTAAAGAGGC CGCGAATCAC GTTAAACGCA TGGCAGAATA CTGTGCCCAA
CTGGCGTTAT TGGCGGGGTT AACTGAGACC GAGGCAGACT TATTACGTCG GGCTTCACCT
ATGCACGACA TAGGTAAAAT CGCGATCCCA GATGCTGTGT TACTCAAACC CGGCAAGTTA
GACGACCATG AGTGGTCGGT GATGCGCCAA CACCCCACTA TTGGACATCA AATTCTTGCC
AATTCCGAGC GGCCGATTTT AAAAGCGGCG GCAATTATCG CCCTACAGCA CCATGAAAAA
TATGACGGCT CTGGCTATCC TGGCAATTTA AAACAAGATC AAATTCACAT TTTTGCCCGC
ATCGTTGCCA TCGCGGATGT GTTTGACGCC CTCTCCCATG CACGTTGTTA TAAAGCCGCG
TGGCCTTTGG ATGAAGTTAT CGACGAAATG CGTAAAGGAG CGGGTAAACA TTTTGACCCG
GATTTACTCT CACTCTTTAT TGAAAACATC GATATCTTTG TCCAAGTCAA AGAAAGCTGG
AAGGATCATG ACGAATAA
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| Protein sequence | MVIDLTNKKP LFSTKKTTET STSGSPWKIL VVDDEPDVHT VTKLALSRFR LDGRALTFIN
AYSGEQAKEL LANEQDIAVA FIDVVMESDH AGLELVKWIR EVQVNKNIRL ILRTGQPGQA
PEEDVIVNYD INDYKAKSEL DSRKLMTSVY SALRSYRDIM EIEQARRTQV NHRKGLERVL
EATSGLFELR TLHRFADGLL TQVATLLNLD TETLLLTCNA MDAISGHVDS AEIEILAGTG
QFANSPPHKD LPEHISKLLR SALMQKRCLY EDNCFVGYFP TKSGLINLLY MDGIDKIDDL
DKKLVDIFAI NVGVAFENLL LNQEVEDTQS ELILRLGDVV ESRSKEAANH VKRMAEYCAQ
LALLAGLTET EADLLRRASP MHDIGKIAIP DAVLLKPGKL DDHEWSVMRQ HPTIGHQILA
NSERPILKAA AIIALQHHEK YDGSGYPGNL KQDQIHIFAR IVAIADVFDA LSHARCYKAA
WPLDEVIDEM RKGAGKHFDP DLLSLFIENI DIFVQVKESW KDHDE
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