More than 300 homologs were found in PanDaTox collection
for query gene MADE_01215 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_01215  Response regulator  100 
 
 
509 aa  1047    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  58.32 
 
 
515 aa  613  9.999999999999999e-175  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  57.39 
 
 
520 aa  609  1e-173  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  56.36 
 
 
513 aa  602  1.0000000000000001e-171  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  56.36 
 
 
513 aa  601  1.0000000000000001e-171  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  56.36 
 
 
513 aa  601  1.0000000000000001e-171  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  56.36 
 
 
513 aa  601  1e-170  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  43.65 
 
 
525 aa  441  9.999999999999999e-123  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_004347  SO_2366  response regulator  42.66 
 
 
525 aa  422  1e-117  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  42.32 
 
 
522 aa  416  9.999999999999999e-116  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  42.86 
 
 
521 aa  416  9.999999999999999e-116  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  42.11 
 
 
523 aa  412  1e-114  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  42.11 
 
 
523 aa  412  1e-114  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  42.08 
 
 
525 aa  414  1e-114  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  42.45 
 
 
522 aa  412  1e-113  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  42.3 
 
 
523 aa  410  1e-113  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  43.1 
 
 
527 aa  410  1e-113  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  42.3 
 
 
523 aa  410  1e-113  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  42.3 
 
 
523 aa  410  1e-113  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  42.46 
 
 
525 aa  407  1.0000000000000001e-112  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  42.46 
 
 
525 aa  407  1.0000000000000001e-112  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  43 
 
 
526 aa  408  1.0000000000000001e-112  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  40.31 
 
 
524 aa  399  9.999999999999999e-111  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  40.24 
 
 
518 aa  399  9.999999999999999e-111  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  43 
 
 
523 aa  397  1e-109  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  39.68 
 
 
523 aa  381  1e-104  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  41.83 
 
 
536 aa  378  1e-103  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02571  response regulator  38.57 
 
 
521 aa  369  1e-101  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  39.31 
 
 
531 aa  364  2e-99  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  40.37 
 
 
508 aa  358  1.9999999999999998e-97  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  44.23 
 
 
437 aa  335  1e-90  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  37 
 
 
471 aa  332  1e-89  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  34.72 
 
 
517 aa  305  1.0000000000000001e-81  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  35.5 
 
 
531 aa  304  2.0000000000000002e-81  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  35.12 
 
 
529 aa  301  2e-80  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  34.58 
 
 
512 aa  293  6e-78  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_009718  Fnod_1101  response regulator receiver modulated metal dependent phosphohydrolase  31.33 
 
 
450 aa  227  3e-58  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  35 
 
 
581 aa  201  1.9999999999999998e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0306  metal dependent phosphohydrolase  42.8 
 
 
361 aa  201  1.9999999999999998e-50  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  36.74 
 
 
579 aa  199  7.999999999999999e-50  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  34.67 
 
 
582 aa  198  1.0000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  49.47 
 
 
362 aa  196  9e-49  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  36.07 
 
 
580 aa  195  2e-48  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  33.9 
 
 
578 aa  195  2e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  34.35 
 
 
580 aa  193  6e-48  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  35.26 
 
 
337 aa  192  8e-48  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2117  histidine kinase  34.85 
 
 
631 aa  189  1e-46  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  34.09 
 
 
593 aa  188  2e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
331 aa  185  1.0000000000000001e-45  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
432 aa  185  2.0000000000000003e-45  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  31.54 
 
 
613 aa  184  3e-45  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  45.77 
 
 
350 aa  184  3e-45  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  42.72 
 
 
328 aa  184  3e-45  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  44.07 
 
 
348 aa  183  6e-45  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  34.29 
 
 
550 aa  183  6e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  35.91 
 
 
767 aa  183  6e-45  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.788805 
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  36.24 
 
 
740 aa  182  1e-44  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  43.5 
 
 
363 aa  181  2e-44  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  43 
 
 
331 aa  181  2.9999999999999997e-44  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  44 
 
 
360 aa  181  4e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  46.91 
 
 
340 aa  181  4e-44  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.72 
 
 
746 aa  179  9e-44  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  40.36 
 
 
353 aa  179  1e-43  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  43.65 
 
 
352 aa  178  2e-43  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  41.92 
 
 
399 aa  178  2e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  41.5 
 
 
331 aa  177  5e-43  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4963  response regulator receiver modulated metal dependent phosphohydrolase  45.21 
 
 
350 aa  176  7e-43  Methylobacterium populi BJ001  Bacteria  normal  0.102256  normal  0.0892849 
 
 
-
 
NC_011757  Mchl_3816  response regulator receiver modulated metal dependent phosphohydrolase  43.55 
 
 
351 aa  176  8e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0960158  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  43.65 
 
 
338 aa  176  8e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  40.5 
 
 
331 aa  176  8e-43  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  40.5 
 
 
331 aa  176  8e-43  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  46.67 
 
 
350 aa  176  8e-43  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0538  response regulator receiver modulated metal dependent phosphohydrolase  42.33 
 
 
363 aa  176  9e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.973232  normal 
 
 
-
 
NC_013552  DhcVS_1406  response regulator  45.7 
 
 
351 aa  175  9.999999999999999e-43  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3509  metal-dependent phosphohydrolase  43.55 
 
 
351 aa  175  1.9999999999999998e-42  Methylobacterium extorquens PA1  Bacteria  normal  0.305053  normal 
 
 
-
 
NC_010172  Mext_4449  metal-dependent phosphohydrolase  45.21 
 
 
358 aa  174  2.9999999999999996e-42  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.508967 
 
 
-
 
NC_011894  Mnod_1253  response regulator receiver sensor signal transduction histidine kinase  34.78 
 
 
584 aa  174  2.9999999999999996e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  44.85 
 
 
338 aa  174  2.9999999999999996e-42  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4913  response regulator receiver modulated metal dependent phosphohydrolase  45.21 
 
 
354 aa  174  2.9999999999999996e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.478904  normal  0.760596 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  41.12 
 
 
343 aa  174  3.9999999999999995e-42  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  42.71 
 
 
346 aa  174  3.9999999999999995e-42  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_25160  response regulator  41.35 
 
 
356 aa  173  7.999999999999999e-42  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  40.29 
 
 
331 aa  173  7.999999999999999e-42  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  44.33 
 
 
338 aa  172  9e-42  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  44.33 
 
 
338 aa  172  9e-42  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  44.33 
 
 
338 aa  172  9e-42  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  41 
 
 
344 aa  172  1e-41  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  44.5 
 
 
340 aa  172  1e-41  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  43.15 
 
 
338 aa  172  1e-41  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  43.15 
 
 
338 aa  172  1e-41  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3219  putative PAS/PAC sensor protein  39.5 
 
 
793 aa  172  1e-41  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2138  metal dependent phosphohydrolase  46.07 
 
 
606 aa  171  2e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.258694  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  44.33 
 
 
338 aa  172  2e-41  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0591  putative membrane associated signaling protein  45.41 
 
 
596 aa  172  2e-41  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  40.62 
 
 
348 aa  171  4e-41  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  46.99 
 
 
339 aa  171  4e-41  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  34.72 
 
 
741 aa  170  5e-41  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  40.18 
 
 
348 aa  170  6e-41  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  38.89 
 
 
354 aa  169  1e-40  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_010424  Daud_1728  putative PAS/PAC sensor protein  37.21 
 
 
1171 aa  169  1e-40  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00367624  n/a   
 
 
-
 
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