Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0131 |
Symbol | |
ID | 6091030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 158743 |
End bp | 159480 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595191 |
Product | two component transcriptional regulator |
Protein accession | YP_001718897 |
Protein GI | 170022392 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.364585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTG CAATCCTCGT GGTGGATGAC GATACGGCCA TCTGTGAAGT GCTGCGAGAT GTACTTAACG AACACGTATT CGATGTACTG TTATGCCACA GCGGCAATGA GGCGCTTCAG ATTACCGCTA CACAGCCCTC AATCGCACTT ATTTTGCTTG ATATGATGCT GCCGGATATC AATGGCCTGT TGGTGTTGCA GCAAGTGCAA AAACTGCGCC CGTCGCTACC GGTCGTGATG CTCACCGGCA TGGGTAGTGA GTCTGATATG GTGGTTGGGC TAGAAATGGG GGCGGACGAC TATATCGCTA AACCATTTAA TGCCAGGGTA GTGGTCGCAC GCGTTAAAGC GGTGTTGCGG CGGAGCGAGG TGTTGGCGAT AGAAAGTAGC AGTGTGATAG AAAGTAGCAG TGTGAAAGCC TGCGGATTGC AATTTAATGG CTGGCGGCTG AATACCGACC GCTGTCAGTT GATGAACCCA CAGCAGCAGC AAATCGATTT GACTCAGGGG GAATATGGCC TGCTGCTGTC GTTGATGCAA AACGCCAGAA AAGTGCTCTC TCGTGAAAAG CTGCTTGAAC TGACGCACCG TGAAAGCCTG GACGTTTTTG ATCGCACTAT TGATGTACTG ATTATGCGGT TACGTCGAAA AATAGAAGTT AATCCGCACC AGCCCACACT GATCCGTACC ATCCGCGGCG TGGGGTATGT CTTTGCCGCC GATATTATTC ATGCCTAG
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Protein sequence | MKPAILVVDD DTAICEVLRD VLNEHVFDVL LCHSGNEALQ ITATQPSIAL ILLDMMLPDI NGLLVLQQVQ KLRPSLPVVM LTGMGSESDM VVGLEMGADD YIAKPFNARV VVARVKAVLR RSEVLAIESS SVIESSSVKA CGLQFNGWRL NTDRCQLMNP QQQQIDLTQG EYGLLLSLMQ NARKVLSREK LLELTHRESL DVFDRTIDVL IMRLRRKIEV NPHQPTLIRT IRGVGYVFAA DIIHA
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