| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0118 |
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| Symbol | |
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| ID | 7107804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 130462 |
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| End bp | 136245 |
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| Gene Length | 5784 bp |
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| Protein Length | 1927 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643478394 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002375456 |
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| Protein GI | 218437127 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.125924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATT TCCTAACCGG TCAACCTAAT CCTGTACAAG AGTGTCCTTA CTGGACTATT
CTAATTATTG ATAAAGATAT TAAATTTCAT CAGAGAATAA GGGCTTTACT CGCAAATCTA
AATTTTTTCT CAAGAAAATT CAATCTAGTG TCAATCTATG CTATAGAAAA TCTAGATAAG
TATTTAAACC AATATTCAAA TATAGCTCTA ATTTTATTAA GTCAATCCTG GGATGTTGCC
GAAGTAATTA ATCAGATTAC TGAAGCCCTC AAAACTAATT TATTTAGACT CATATTATGT
TGTGAAAATG AAGAAAATTT ACCGCCTATT TCCCAAATAA TTAATTATCA TATAACCGAT
TGTTTAGTCA AAGATAAAAC CACTGACCCA GAGCTAAGTT TAACATTAAT CTCGGCCTTA
AAATCCTACG AAGAAGTTAT AAACATAGCT AATAAAAGTC AAAATTATAG ACAAATAAAA
CTAGAAAATA TCAAAGAAAA AGAGCAAAAA GAAATCAAAA AACTCAGACC GATCAAAGCC
GTTTTACAAG AAAGTGAGCA ATTATTCCAG ACTATGGCTG ATCAAGCCCC GGTGATGATT
TGGATCTCAG GAACAGATAC ATTATGTTAT TATTTTAACC AAGTTTGGTT AGACTATAGC
GGACGAACTT TAGAGCAAGA AATGGGAAAC GGATGGGCGG AAAATGTACA TCCTGAAGAT
TTTCAATACT GTTTAGATAC TTATCTTAAA GCTTTTGAAA AACGAGAAAG CTTTCAGATG
GAATACCGCT TGCGTCGATG GGATGAAGAA TATCGCTGGC TTTTAGATCA TGGGACTCCT
CGTTTCAGTT CAGAGGGAGA ATTTCTCGGT TATATTGGCT CTTGTGTTGA TATTAGCGAT
CGCAAAGAAA CCGAAAAAAA ACTGCAACAA ACTCGTAAAT TCCTGCAAAC TGTTTTAGAT
TATCTTCCTA TAGCTGTATT TGTTAGAGAT GGACAAAAAG ACCATTTTGG TCAATATTTA
TTTTGGAATA AAACTTGTGA GCATCTCTTT GGAATTAGTG CAGAAGAAGC ATTAGGAAAA
ACCAGAGATG AACTTTTTCC CCAAGAAATC CCCGACTTTT TCCGTCAAAA AGATCGAATA
TTATTTGAAA ATAATAATAT TGAAAATATC CCCGCCGAAA TCGTAGAAAG TCAAAAACTA
GGTCAGCGAA TACTTCACAC GGTAAAACTT CCTTTATATG ACGAAACCCA TCAGCCTAAA
TATATCCTAG GATTTTCCGA AGATATTACT GATCGTATAA AAGCAGAAAC AGAACGAACT
TATTTAGGTC AACTTTTAGA AGCGAGTCTC AATGAAATAT ATGTTTTTAA TGCCCAAACT
CTAAAATTTC AATATGTTAA CCCATCAGCC TTAGAAAATC TGGGCTATAG TTGGGAACAA
ATGCAACAAA TGACTCCTCT TGACCTAAAA AGGACTTTTA CCCTAACTAC ATTTAAACAA
TTAATCTTAC CCTTAAAAGA ACATCAGCAA GAAAGATTAA TTTTTGAAAC CTATCATTAT
CGTAGTGATG GCAGTGTCTA TCCGGTTGAA GTGCATTTAC AATTGATGGA ACGTCCAGAG
GGAAACGTCT TTTTAGCAGT TATTTTAGAT ATTACAGAAC GACAACAGGC ACAACTCGCT
TTACAACAAG CTTATGAACA ATTAGAAATT CGAGTTCAAG AACGCACTGC CCAATTAGAA
CAGATTAATC AATTATTACG ACAAGAAGTT AACGATCGCC ATCGAATTGA AACAGCCTTA
TGTAATATAG CGTTAGGAGT AACAACCACT AATAGTCAAA TTTTCTTTCA ATCTCTAGTG
CAATATATGG CTAAAGCGTT AGGGGTAGAA TTTGCCATCA TAGCCAAATT TATTAATGAG
CAAAAAAAGA AAGCCAAAAC AATAGCAGTA TGTATCAAAG ATGAAATCGT TGACAATTTT
GAATATGACC TAGAAAATAC TCCAGAAGAC GACTCTATTC AACAAGGTTT ATCGGATTAT
TGGCAACAGA TAAAACAACA ATTTCCCCAA AAAGACTCTA TCCAAAACAT GGATATAGAA
AATTACCTAG GGGTTTCTCT ATTAGATTCA GAGGGAAATG CGATCGGGTT AATGGGGGTT
ATTGATACAA AAGCCCTTGA CGATCATAAA TTTTTAACAG AAATTCTCCA AATTTTTGCC
GCTCGTGCTG TTACAGAATT AGAACGGCAA CAAGCAGAAC AAAACCTGCG GGAAAGTGAA
GAAAAGTTTC GTCAATTGGC AGAAAATATC AAAGAAATTT TTTATATTCA AGATGCTCAA
ACCTTCCAGA CCATTTATGT CAGTCCTACC TTTTCAGAAA TTTGGGGCAT TTCTTGGGAT
ACTCTTTACC AAAACCCTCA TCTGTGGATG GAAAATATTT ATCCCCCAGA TCGGGCAATT
GTTAGGGCTA ATTTACAAGC CAATAGGAAT GAACAAGAGT TTAATTATGA ATATCGCATT
ATCCGACCCG ACGGTCAACT GCGTTGGATT TGGGCGCGAA ATTTTCCGGT TAAAGATTCA
TCCGGCAACA TCTATCGCAT TGCCGGTATA GCTGAAGATA TCACCGAACG AAAACAGACA
CAAGAAGCCC TAAAAACTCT CAATCAAAAC CTAGAAAACT TAGTCGAAGA ACGCACCGTT
CAACTACAAC AAATTATCGA ACAGCATCAA CAAACCGAAG AAGCTTTACG TAAAAGTGAA
GAACGATGGC AATTAGCAAT TTATGGCACG AATGACGGAT TATGGGACTG GAATCCTCAA
AACAATGAAC TTTTTTTGTC CTCTCGATGG AAAGAAATGT TAGGCTATGA AGACCATGAA
ATTAGCAGTC ATCTTCGAGA ATGGAGTAGT CGAGTTCATC CTGATGACTT GCAAGAAGTT
TTAAGACAAG TCATGGATCA TTTAGCCAGA AAAACCGATT ATTACGAAAG TGAATATCGA
GTTAGATGCA AAGATGGAAC TTATAAATGG ACGCTAGATC GAGGTAAAGC GGTTTGGGAT
GAAACCGGTA AACCTATCCG AATGGTGGGT TCTCGTCGGG ATATCACTGA CGCAAAACAA
GCCGCCGAAG AACTCAAACG TCAAAAAGAA GTCTTACAAA CCATCTTTGA TCATATTCCT
GTGATGATCA TTTTATTTGA TCCCACTGGA GAGATTCAAT TAGTTAACCG CGCCTTAGAA
AAAACTTTAG GATGGTCTTT AGAGGAAATA CAACAGACCG ATTTTTTAGT AGAATGTTAT
CCCGATCTTC AATATCGTCA AAAAGCCATT AATCATATCC TCTATGGCAA TGGACAATGG
CAAGATTTTA AAACTCGGGT GCGAGATGGT CGTATTATAG AAACAACCTG GGCTAATGTT
GAACTATCCG ACGAAACCAA AATCGGCATC GGACAAGATA TTACTATCCG CAAACGCGCA
GAAGCCGCCC TCCAAGAAAC CCAAGATCGC CTAGAATTTA TTTTAAACAA TAGTGGTGCA
GCCCTTTATA CTTGTAAAGC TACCCCAAAT TTAGCCACAA CTTTTATTAC TCAAGGGGTA
GAAACTATGA CCGGTTATAT TCCCGAAGAG TTTATTTATG TTCCCTCTTT TTGGCTGGAT
CATCTTCATC CTGACGATCA AAAATCGATT TTAACTGAAG TTACCCAATT ATTTGAAAAC
GGATTTCATA CCTATGAATA TCGCTTTCAG CGCAGCGACG GAAATTATAT TTGGGTACAA
GATAGAATGC AAGTTATCCA AGATACTCAA GGAAATCCAA TCGAATGTAT CGGTTACTGG
TTTGATATCA CCCACCGAAA ACGAATGGAA GAAGAAATCC GTAATAGTGA ACAAAAATTA
CGGGAAATTA CTTCCTTAGT TCCCGGAATG GTCTTTCAAT TTGGCATCAC TTCTGATGAG
AAATATTTTT TCAGTTTTGC CAGTGATGCT GTCCTCACTA TTTATGAATT GACTCCCGAA
CAAGTTAAGG AAGATGCACA GTGTATCTTG GCTTTAATTA AACCCGAACA ATTAGCACTA
TTTCAAGAAG CACTCGAAGT CTCCCGGCAA AACTTAACTG ATTTTTACTT TGAACATCAA
ATTACTACCC CTAGCGGTAA AGAAAAATGG GTTCGCGTCA GTTCTGTTCC TCAAAAATTG
CCGGATCAAA CGGTGATTTG GAACGGTGTC ACCATTGATT TAACGGTAGA AAAACAAAGA
GAAGCAGAAT TAAAACAAGC CAAAGAAGTT GCCGATCTCG CTAATCGGGC TAAAAGTGAA
TTTTTAGCTA ATATGAGTCA TGAAATCCGT ACTCCGATGA ATGCGATTTT AGGCTTTTGC
GATCTACTCA ATCATTTAGT AACTGATAAC CGAGGACAAT TTTATCTATC CGCGATCGCC
TCAGCCGGCA AAACACTTTT AGCTTTAATT AATGATATCC TTGACCTGTC TAAAATAGAA
GCCGGTAAAC TTCAACTTTA CTATGAACCG GTTAATTTAC CGACTTTAAT TCAAGAAATT
TATCAGATCT TTTCTCAAAA AGCCGAGGAA AAACAGATAA AATTACTGAT GGAAATTGAT
TCATCTGTTC CCACAGGAAT TATTTTTGAT GAAGTTCGGT TACGCCAAAT CCTTTTTAAT
GTAGTGGGAA ATGCCCTTAA ATTTACTGAA GAAGGTTATG TTAAAATATC ACTCAACAGT
TATCATTCAG AAACCCAAGA TCAAGAAGAC TCAATCACCC TAAAAATTAC CATAGAAGAT
ACAGGAATTG GGATTGCTCC AGAACAACAA ACCCAAATTT TTGATGCTTT TATCCAAAGT
GACGGACAAA ATAATCGCAA ATATGGAGGC ACAGGATTAG GATTAGCTAT TACTAAACGA
TTAACCACCA TATTAGGCGG AAAAATCGAG TTATACAGTC AACCCAATCA AGGCAGTATT
TTTTCTTTTA CTTTTTCTAA TGTTAAACTC ATAGAAATTA ATCTTTTACC TCAAAAACCC
GTAATTGTCA ATGAAAGTTT AGAGCAATTT TTACCCTTTG ATGTGTTGAT TGTTGATGAT
ATAAAATCTA ATCGAAACTT AATTCAAGGG TATTTTGAAG GCAGTCAACA CAAACTGAGA
TTTGCCACCG ATGGATTAGA AGCTATTAAT CAAGTTAAAA AATATCATCC AAATCTGATT
TTATTAGATT TAAGAATGCC GAGAATGGAT GGTAAAGAAG TCGCACAGTA TCTCAAAAGT
AATGAAAAAA CTAAAGATAT TATTATTGTA ATTTTAACAG CCTCTTCTCT TCAACAAGAA
GAAAATGAAC TGAAAGAATT ATGCGACGGA TTTCTGCGTA AACCGGTTAG TCGGTCTGAA
TTAGTGTCAG TGCTAAAACA GTTGTTACCT TTACAAGCAA CTCTGAAAAA TCCTCTTCAA
AATGATACTT TAGGGGAGCA TATCGAAAAC ATTTCTCAGG ATAGCGGGTT AGAAAAATCG
GAAAAATTGT CAGAATTATT GGCTCTTTTA GAGGGAGAAA AAAATAATTG GGAACAGGTG
TGTCAAACAA TGATTAGACG AGATTTAAAA AAATTTGCTC AACAATTAAA AATATGGGGT
GAAGATTATC ACTATCCCCC TTTGTTAGAA TATACTAATC TTTTAGAAAA TTATATTCAA
TCTCTTGATG TGGACAAATT ACCCAAGACG ATGAATGCTT TTCCAGAAAT TTTACAAGCT
TTAAAAATGA TAATTGACTC GTGA
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| Protein sequence | MIDFLTGQPN PVQECPYWTI LIIDKDIKFH QRIRALLANL NFFSRKFNLV SIYAIENLDK
YLNQYSNIAL ILLSQSWDVA EVINQITEAL KTNLFRLILC CENEENLPPI SQIINYHITD
CLVKDKTTDP ELSLTLISAL KSYEEVINIA NKSQNYRQIK LENIKEKEQK EIKKLRPIKA
VLQESEQLFQ TMADQAPVMI WISGTDTLCY YFNQVWLDYS GRTLEQEMGN GWAENVHPED
FQYCLDTYLK AFEKRESFQM EYRLRRWDEE YRWLLDHGTP RFSSEGEFLG YIGSCVDISD
RKETEKKLQQ TRKFLQTVLD YLPIAVFVRD GQKDHFGQYL FWNKTCEHLF GISAEEALGK
TRDELFPQEI PDFFRQKDRI LFENNNIENI PAEIVESQKL GQRILHTVKL PLYDETHQPK
YILGFSEDIT DRIKAETERT YLGQLLEASL NEIYVFNAQT LKFQYVNPSA LENLGYSWEQ
MQQMTPLDLK RTFTLTTFKQ LILPLKEHQQ ERLIFETYHY RSDGSVYPVE VHLQLMERPE
GNVFLAVILD ITERQQAQLA LQQAYEQLEI RVQERTAQLE QINQLLRQEV NDRHRIETAL
CNIALGVTTT NSQIFFQSLV QYMAKALGVE FAIIAKFINE QKKKAKTIAV CIKDEIVDNF
EYDLENTPED DSIQQGLSDY WQQIKQQFPQ KDSIQNMDIE NYLGVSLLDS EGNAIGLMGV
IDTKALDDHK FLTEILQIFA ARAVTELERQ QAEQNLRESE EKFRQLAENI KEIFYIQDAQ
TFQTIYVSPT FSEIWGISWD TLYQNPHLWM ENIYPPDRAI VRANLQANRN EQEFNYEYRI
IRPDGQLRWI WARNFPVKDS SGNIYRIAGI AEDITERKQT QEALKTLNQN LENLVEERTV
QLQQIIEQHQ QTEEALRKSE ERWQLAIYGT NDGLWDWNPQ NNELFLSSRW KEMLGYEDHE
ISSHLREWSS RVHPDDLQEV LRQVMDHLAR KTDYYESEYR VRCKDGTYKW TLDRGKAVWD
ETGKPIRMVG SRRDITDAKQ AAEELKRQKE VLQTIFDHIP VMIILFDPTG EIQLVNRALE
KTLGWSLEEI QQTDFLVECY PDLQYRQKAI NHILYGNGQW QDFKTRVRDG RIIETTWANV
ELSDETKIGI GQDITIRKRA EAALQETQDR LEFILNNSGA ALYTCKATPN LATTFITQGV
ETMTGYIPEE FIYVPSFWLD HLHPDDQKSI LTEVTQLFEN GFHTYEYRFQ RSDGNYIWVQ
DRMQVIQDTQ GNPIECIGYW FDITHRKRME EEIRNSEQKL REITSLVPGM VFQFGITSDE
KYFFSFASDA VLTIYELTPE QVKEDAQCIL ALIKPEQLAL FQEALEVSRQ NLTDFYFEHQ
ITTPSGKEKW VRVSSVPQKL PDQTVIWNGV TIDLTVEKQR EAELKQAKEV ADLANRAKSE
FLANMSHEIR TPMNAILGFC DLLNHLVTDN RGQFYLSAIA SAGKTLLALI NDILDLSKIE
AGKLQLYYEP VNLPTLIQEI YQIFSQKAEE KQIKLLMEID SSVPTGIIFD EVRLRQILFN
VVGNALKFTE EGYVKISLNS YHSETQDQED SITLKITIED TGIGIAPEQQ TQIFDAFIQS
DGQNNRKYGG TGLGLAITKR LTTILGGKIE LYSQPNQGSI FSFTFSNVKL IEINLLPQKP
VIVNESLEQF LPFDVLIVDD IKSNRNLIQG YFEGSQHKLR FATDGLEAIN QVKKYHPNLI
LLDLRMPRMD GKEVAQYLKS NEKTKDIIIV ILTASSLQQE ENELKELCDG FLRKPVSRSE
LVSVLKQLLP LQATLKNPLQ NDTLGEHIEN ISQDSGLEKS EKLSELLALL EGEKNNWEQV
CQTMIRRDLK KFAQQLKIWG EDYHYPPLLE YTNLLENYIQ SLDVDKLPKT MNAFPEILQA
LKMIIDS
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