| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2561 |
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| Symbol | |
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| ID | 4174316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3105172 |
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| End bp | 3106725 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055578 |
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| Product | response regulator receiver modulated metal dependent phosphohydrolase |
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| Protein accession | YP_662131 |
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| Protein GI | 109898876 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00356747 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG AGTTGTTATT TGCAGACGAT ACCGATGAAG ACACAGTTCA GTACCAAGGC
ACATGGAAAA TTCTCATTGT TGACGACGAG CCAGAAATTC ACGCGGTAAC AAAACTGGCA
TTGAGTGATT TTGAGTTTCA AAATAAAAAT TTAGAGTTTC TGAGTGCATA CAATGGTGTT
CAAGCTCGTG AAATATTGTT GAGTGAACCA GACATTGCCG TCGTTTTATT AGATGTGGTG
ATGGAAACCG ATGACGCAGG TTTAAGAATT GCCGATTTTA TTCGCAATGA AGCGAATAAC
CATTTCATCA GGATCATTTT ACGCACAGGC CAACCAGGTC AAGCCCCAGA GCGTGATGTG
ATTATCAATT ATGATATCAA TGATTATAAG TCTAAAACCG AATTAACCGC GCAAAAGCTG
TTCACTGTGG TTATTGCAGC GCTGCGGTCT TATCGTGACA TAGTGGCAAT CAATGAGAAT
CGTATTGGCT TAGAAAAAAT TATCTCAGCA TCTGCTAACC TATTCCAAAC TCATTCCGTC
GAGCACTTCA TTGAGGGCAT CGTACAGCAA CTCTCATCTT TACTCGGGGG CAGCAAAGAT
GCAGCTTACT TAACCTGCGC CGTCGCGGGA CCTAAGTCCT CAGAGACATC ACGTTTAAAC
TCCTTAGAGC AGCTTTATGT GTTTACTGGA CAGGGTGAAT ACAAGAGGGC AGCGGGAAAG
TCATTGTCAT CGGTGTTATC AGGGGAGCAT TTAGAAGCGT GTCGCGCAGC ACTGAACAAC
AAATCTTTGG TTTACGAAGA CGAGTATCTG GTAGCGTATT GTGAGAGTAA ACGAGGTTCC
GGCTCTTTAC TTTACTTGTC CGGATTGCCA AAAAAGTTAA CTGATTCCCA GAAAAAACTA
GTAGAAATTT TCTCGCAAAA TGTGCAAATC GCTTTTGACA ACATCATGTT GACCAAGGAC
ATCGAAGACA CCCAACGGGA AATTATCGAG CGTTTAGGAC AAGTTACTGA AGATGGGGCA
ATCAGTCTTG ACTACACGCA ACGCATCGTT GATGTGTGTA AGGTACTAGG GAAAGCGCTA
AATTTAGACA AATCGCAGCT AAAATTATTA ACCTCGGCGG TGCCCCTACA CGATGTGGGC
AACTTGTGCG GGTCTACCCA TGCGTTATTC AAATTAGAGC AACTCACACA AGACGATGTT
GACTCAATCG ATAAGCACAC TAACTTTGGC TATCGGCTAT TAAAAGGGTC AAACAAGCCG
TTGATCAAAA TAGCCGCCAC GATTGCTAAA GAGCATCATG AATATTGGAA TGGACAAGGT
TATCCTAATG GTTTGAAAGG GGATAATATT CACTTGTATT CACGCGTGGC ATCTATCGCC
ATTGCCTACA GTGTCATGCG CTGTCCTGCA CAAGAAACAG CAGCATGGTC AGTTGAAAAA
GCGCTGGAAC GCGTTCAAGC ATTGGCCGGA GAGCAGTTTG ACCCAAATTT GGTGGCCTTG
TTAAGTGAAA ATATTCATCA AATTGAGGGT GTCAGTCAGG GGGCTGTGCG TTAA
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| Protein sequence | MNDELLFADD TDEDTVQYQG TWKILIVDDE PEIHAVTKLA LSDFEFQNKN LEFLSAYNGV
QAREILLSEP DIAVVLLDVV METDDAGLRI ADFIRNEANN HFIRIILRTG QPGQAPERDV
IINYDINDYK SKTELTAQKL FTVVIAALRS YRDIVAINEN RIGLEKIISA SANLFQTHSV
EHFIEGIVQQ LSSLLGGSKD AAYLTCAVAG PKSSETSRLN SLEQLYVFTG QGEYKRAAGK
SLSSVLSGEH LEACRAALNN KSLVYEDEYL VAYCESKRGS GSLLYLSGLP KKLTDSQKKL
VEIFSQNVQI AFDNIMLTKD IEDTQREIIE RLGQVTEDGA ISLDYTQRIV DVCKVLGKAL
NLDKSQLKLL TSAVPLHDVG NLCGSTHALF KLEQLTQDDV DSIDKHTNFG YRLLKGSNKP
LIKIAATIAK EHHEYWNGQG YPNGLKGDNI HLYSRVASIA IAYSVMRCPA QETAAWSVEK
ALERVQALAG EQFDPNLVAL LSENIHQIEG VSQGAVR
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