| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3810 |
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| Symbol | |
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| ID | 3966884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4812592 |
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| End bp | 4814883 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637922907 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_529277 |
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| Protein GI | 90023450 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATT TCATTGCAAC CAACAATTCT GTTCAAGCTT CTAGTACGGC GCCGGCAACG
AACCCGACGA TGGATTTCGA TATAATCGAC GATACCGATC AGAATACGCC GATACCAAAG
CGCAAAAATG GTAGTTGGAA AATTCTAATT ATCGATGATG AAGATGAAAT TCACCAATCA
ACAAAATTTG CGCTTAAAGG AACAAAAATA CTCGATAAGA CCATCGATAC TTACCATGCT
TACTCGGCTG CCGAAGGCCT GGAAAAAATT CGTGCAACAC CTAATTTGGC ATTAATTTTA
TTAGATGTAG TAATGGAATC TGCCGATGCA GGCCTGCGCC TAGTAGAGAC CATTCGCAAC
CTAGGCTATA CCGAAGTGCG TATTATTTTG CGTACAGGTC AACCCGGCTA TGCACCAGAA
CTTACGGTAA TGAGCGAGTA TGATATCAAC GATTACCGCA CCAAATCTGA ACTTACGCGC
ACACGCTTAA TAAGCTGTTT AACAACCGCA TTTCGGTCCT ACCAACAAAT TCACATTATT
AATTCCAGCC GCCATGGTTT AGAGCTTATT ATCAATAGCG CCAAGGATAT ATTTAAACGC
CGGAACATTA ATATGTTTGC CAGAGGCGTG CTTACCCAGC TTATAGCGCT GCGCGGCGAA
CCAGCCGATG GCATTGTGTT TTTACTTTCT GATTCCGGTG ACCAAGATCT CAGTACGGAA
AACTTGCTAG GAAGCATGGA AGTTATTACC ACTACCAGAA AATTTGAAAA GTTTTCTACC
AGTAACTTGG CAGACATGCA ACAAGAAGAA ATTTATCAAG CCATCTACCG AGCATATTTT
TCTAAACAAG GTATAGATTT AGAACATGGC TTAGGTTTGC ACTTCTCTTC TAGCGAAGGT
AAGCAGCTTT TTATTTATGT GGATGAGTTT TCTGATTGCG ATAGCCAACA TGCAACCCTA
CTGAAAGTAT TCGCAGGTAA CATTGCCATT GCATTCGAAA ACCTAGCACT TATCGAGCGA
TTGGATGAGC TTGCCTATAT TGACCCCATT CTAAAAATTC CCAATACCAA CGCCCTTAGC
CAACAGATAG AAAACTTAAG TACAACGAAT CAAGCGCTAT CACTCATTAC TGTTCATATC
AATCAAATTG AACACGCAAT TGTTGTGTTT GGCCACACTA TTGTTAACCA AGCATTAGTA
GATTTGCGCG AAAAGTTTAT CACCGAGCTA ACCCCCTCAC CCTTTTGCGT GGCCAGCGAC
GGCAAAGAAG ATCTATTTTT ACTAGTACCT TCCACCCACA ATTACAGCCA AACGATAAAA
AATATTCTCG ATCAAAAAAT ATGTGTAGAT GGTATTACTC TTTCGTTTAG TGCCATTATT
TCCATAGCAG ATGTAGAAGA AGATATGGAT TCACAAACCG TGGTACGGAA CTCCATTTCT
GCACTTATAT TGGCTGCAAC ACAATCAGGC ACCAACAACG TTGTAAAATA CGACGCTAAA
ATAAATTCAG CGCTTAATAA ACGCATACTT ATGCAAAGTT CACTGCGTGA GGCATTAGAG
TTTAATGGCG GAGTGCAAGC CTATTTACAG CCCAAGGTGA ATTGCGCCGA CGGTAAGTTA
GTAGGGGCAG AAGCGCTGTG CCGTTGGGAG TTAAACGGAA ATGCGATTGC CCCAGATGAG
TTTGTTCCTA TCGCCGAGGC CGGCGGCCTT TCAAGTAAAT TAACCGATGC CATGTTAATT
CAAATAGCCA ACTTTGCAGA AAGCCGAAGA GCGAAAAACC TGCCCGTTTT ACCCGTGGCA
GTTAATCTTT CTATGAATGA ACTGCATATA CCCAACTTTG CCGACTCTAT GCACAATCAT
TTACTTTCGC TAGGGCTATC ACCGAATACC ATCGAGTTTG AAATCACCGA AAACGTAATG
ATGCTGGATC CAGATAAAAC CATTTACGAG TTAAGTCGCT TACGCGAATT GGGCTACTAC
CTCGCCATCG ACGACTTTGG TACGGGGTAT TCATCATTAA ACTATTTACA TCGCTTGCCA
GTTCACTGCT TAAAAATAGA TAAAATGTTC ATTAATCAGC TAGATATAAA CTCAGCCAAA
TCAAGCTTAG CCGCCACATC TATTTCAATT GCAGAGAAAC TGGGCCTAAC CGTCATTGCC
GAAGGCATAG AAACGCAGGA ACAACACGAT GCGCTTAAAT TTTTAGGCTG TAATATTTGC
CAGGGGTATT TGTTTGGCAA ACCAATAGCG GCAGAAAATT TTAATAGAAC GCATAGTATT
CGACAAACCT AA
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| Protein sequence | MSHFIATNNS VQASSTAPAT NPTMDFDIID DTDQNTPIPK RKNGSWKILI IDDEDEIHQS
TKFALKGTKI LDKTIDTYHA YSAAEGLEKI RATPNLALIL LDVVMESADA GLRLVETIRN
LGYTEVRIIL RTGQPGYAPE LTVMSEYDIN DYRTKSELTR TRLISCLTTA FRSYQQIHII
NSSRHGLELI INSAKDIFKR RNINMFARGV LTQLIALRGE PADGIVFLLS DSGDQDLSTE
NLLGSMEVIT TTRKFEKFST SNLADMQQEE IYQAIYRAYF SKQGIDLEHG LGLHFSSSEG
KQLFIYVDEF SDCDSQHATL LKVFAGNIAI AFENLALIER LDELAYIDPI LKIPNTNALS
QQIENLSTTN QALSLITVHI NQIEHAIVVF GHTIVNQALV DLREKFITEL TPSPFCVASD
GKEDLFLLVP STHNYSQTIK NILDQKICVD GITLSFSAII SIADVEEDMD SQTVVRNSIS
ALILAATQSG TNNVVKYDAK INSALNKRIL MQSSLREALE FNGGVQAYLQ PKVNCADGKL
VGAEALCRWE LNGNAIAPDE FVPIAEAGGL SSKLTDAMLI QIANFAESRR AKNLPVLPVA
VNLSMNELHI PNFADSMHNH LLSLGLSPNT IEFEITENVM MLDPDKTIYE LSRLRELGYY
LAIDDFGTGY SSLNYLHRLP VHCLKIDKMF INQLDINSAK SSLAATSISI AEKLGLTVIA
EGIETQEQHD ALKFLGCNIC QGYLFGKPIA AENFNRTHSI RQT
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