Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4413 |
Symbol | |
ID | 3960046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007901 |
Strand | - |
Start bp | 179481 |
End bp | 181178 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637909621 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_516097 |
Protein GI | 89885899 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGC AAGATAAAAA ATGGAGAGTC CTTGTCGTTG ACGACGATGC GGATGTTCTG ACAAACACCG TCTACACCCT GATGGATCTC AAGGTTTTAG GGCGTGAGTT GGATATAACC ACGCTGGGCA GTGCTACGGC AGCGATTGAG TTGCTTGAAA GGGAGCGTGA TTTCGCTGTA ATTTTGTTGG ATGTTGTCAT GGAGAAACCC CACGCGGGAT TGAGCCTGGT GACCATGATT CGTCATGATT TCAATATGCA AATGTCTCGG ATCATTTTGA GGACGGGTAA CCCCGGATAC GCCCCAGAAC GAGATATAAC CCTGAAGCTG GAAATCGACG ACTACATCCT TAAGCAAACA GCCGTTCGTG ATCGGATAAT CACGGCAGTG ATTGTTGCCA TCAGAGCCTA TGATCAACTA CAGCGATTGG CGCGATTGAA GGACGCCATG CAGCAAATAA TTTGTTGTTC GAATCAGCTT TTGACTACAG ACGAAATCGA CCAGTTTGCA AACGTCTGTA TGCAGTACGT TGCGCCTATT TTTGGAAAGA ATGCCGGTGG GGGACTGGCC TACGCCGGTA TGACAGTAAA TCAAGGGATA GTGCCCCTGA CCGTGATGTC GGCAACCAGC GAGCATGAGT CTCTCATTGA ACCGTTGAAT GGAATCGGCG TTTTGCCTCC CAATATTTCA GTGACCAAGA AGAAGATGAC CAAGGCGTTG GAGCAGACGA ATAGCATTAA GACCGACAAA GATTGGTACA TCTACATCAA AGTTTCACTC GGGCGCAAGG TGGTGCTTTG GTTGAACAAG CCTGACGGGT TTGATGAAAT CGACGAGACA CTCGGGAAGT CCTTTGCCAA CACCATCAAA GCATGCTTAG ATCGGCTGTG CTTGCTCCGG GAACGGATGG CTGAGGCGAT GGTATCGATT GGAATTTTCG CTCATGAATT CAGGACCCCT ATCGCATCCA TGCGAATGAG CAATGAATTC ATGCTCGAAT CGCTTGAAGC CGGCGAATGC GACAAAGAGC GGTTCAAAAT ATTACTCAAC AATACCGACC GGATTCTGAA CGGCATGAAC AGGCACATCG ATTCGTCAAT GATAAATGTT GGCGTCGTGC TGAGAGAGCG GCTGGAGTTG CCTGTGGCCA GGGTAAACAT TGGGCCGATC GTCAGGGAGT CGTTGGAGGT CAACAAGAAT TGGTTTTCAA AAGCAGGGCA AATGCGAGTC CACATTGAAG ACGATTGTTG GGCCCGAGCA GATGGCACCA TGTTCGAATA TGCATTCGTC AATCTGGTGG GCAACGCCAT CAAGGCGCTA TCTAACAGCA CAACGCATTT CGATGGGCCG AAAATTGAAA TTGAATTGAC TAAACAAGAC GGTCAAATCC GGTTGGTCAT TGCGGACCAT GGCTCCGGGA TTCGCGCGGA CCAACTCGAC AAAATATTCG ATCCGTTTTA TTCCACCAGT GGGACACCGG CGCATGGTCT TGGGTTGACA ATGGTGAAAA GGGCGGTGCA GGCCATGGGT GGAACCATCG AATGCAGTTC CGAGGTTGGG GTTGGGACAA CCTTTGTCAT TCAATTGAAC GCCTTTGACG TGCCACCACC GGAACCGTTG AACCATGTCG GCCGGCTGGA GAGGCGATTG TCAGAGCGCC CAGTTGTCGC CCGGCACGCG CCTGCTCAGC CCGGCTGA
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Protein sequence | MNKQDKKWRV LVVDDDADVL TNTVYTLMDL KVLGRELDIT TLGSATAAIE LLERERDFAV ILLDVVMEKP HAGLSLVTMI RHDFNMQMSR IILRTGNPGY APERDITLKL EIDDYILKQT AVRDRIITAV IVAIRAYDQL QRLARLKDAM QQIICCSNQL LTTDEIDQFA NVCMQYVAPI FGKNAGGGLA YAGMTVNQGI VPLTVMSATS EHESLIEPLN GIGVLPPNIS VTKKKMTKAL EQTNSIKTDK DWYIYIKVSL GRKVVLWLNK PDGFDEIDET LGKSFANTIK ACLDRLCLLR ERMAEAMVSI GIFAHEFRTP IASMRMSNEF MLESLEAGEC DKERFKILLN NTDRILNGMN RHIDSSMINV GVVLRERLEL PVARVNIGPI VRESLEVNKN WFSKAGQMRV HIEDDCWARA DGTMFEYAFV NLVGNAIKAL SNSTTHFDGP KIEIELTKQD GQIRLVIADH GSGIRADQLD KIFDPFYSTS GTPAHGLGLT MVKRAVQAMG GTIECSSEVG VGTTFVIQLN AFDVPPPEPL NHVGRLERRL SERPVVARHA PAQPG
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