More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_0401 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_0401  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
415 aa  856    Magnetococcus sp. MC-1  Bacteria  normal  normal  0.653943 
 
 
-
 
NC_007643  Rru_A0553  response regulator receiver Signal transduction histidine kinase  31.9 
 
 
440 aa  180  4e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.580246  n/a   
 
 
-
 
NC_008751  Dvul_0402  response regulator receiver sensor signal transduction histidine kinase  33.67 
 
 
398 aa  168  1e-40  Desulfovibrio vulgaris DP4  Bacteria  normal  0.93747  normal  0.145713 
 
 
-
 
NC_010002  Daci_0735  PAS/PAC sensor signal transduction histidine kinase  38.66 
 
 
841 aa  149  1.0000000000000001e-34  Delftia acidovorans SPH-1  Bacteria  normal  0.310558  normal 
 
 
-
 
NC_012918  GM21_2711  Hpt sensor hybrid histidine kinase  35.76 
 
 
818 aa  147  4.0000000000000006e-34  Geobacter sp. M21  Bacteria  n/a    normal  0.0181892 
 
 
-
 
NC_009523  RoseRS_0204  integral membrane sensor hybrid histidine kinase  40.4 
 
 
687 aa  147  4.0000000000000006e-34  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.478023 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  41.34 
 
 
526 aa  145  1e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_009483  Gura_1571  multi-sensor signal transduction histidine kinase  38.53 
 
 
592 aa  145  1e-33  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.0000011549  n/a   
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  40.88 
 
 
524 aa  145  1e-33  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_009952  Dshi_3346  multi-sensor hybrid histidine kinase  36.68 
 
 
781 aa  144  2e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.570391  normal  0.852351 
 
 
-
 
NC_011146  Gbem_1505  multi-sensor hybrid histidine kinase  34.77 
 
 
818 aa  144  2e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2694  PAS/PAC sensor signal transduction histidine kinase  38.36 
 
 
589 aa  143  4e-33  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.87998 
 
 
-
 
NC_011884  Cyan7425_3699  histidine kinase  35.47 
 
 
998 aa  143  6e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2868  PAS/PAC sensor signal transduction histidine kinase  36.44 
 
 
593 aa  142  9e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  41.07 
 
 
531 aa  142  9.999999999999999e-33  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_010717  PXO_00620  two-component system sensor protein  33.1 
 
 
1131 aa  142  9.999999999999999e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.282271  n/a   
 
 
-
 
NC_010505  Mrad2831_0213  multi-sensor hybrid histidine kinase  39.69 
 
 
974 aa  141  3e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0934932  normal 
 
 
-
 
NC_011146  Gbem_2951  multi-sensor signal transduction histidine kinase  37.5 
 
 
584 aa  140  3e-32  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  39.66 
 
 
521 aa  140  3e-32  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_008576  Mmc1_1217  multi-sensor hybrid histidine kinase  35.29 
 
 
803 aa  140  3e-32  Magnetococcus sp. MC-1  Bacteria  normal  0.503931  normal  0.0882093 
 
 
-
 
NC_010002  Daci_1871  PAS/PAC sensor signal transduction histidine kinase  39.08 
 
 
842 aa  140  3.9999999999999997e-32  Delftia acidovorans SPH-1  Bacteria  normal  0.464371  normal 
 
 
-
 
NC_010511  M446_1526  multi-sensor hybrid histidine kinase  39.62 
 
 
975 aa  140  4.999999999999999e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1898  multi-sensor signal transduction histidine kinase  34.62 
 
 
571 aa  139  7e-32  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.589687  n/a   
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  43.4 
 
 
578 aa  139  7.999999999999999e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  41.51 
 
 
525 aa  139  7.999999999999999e-32  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  41.51 
 
 
525 aa  139  7.999999999999999e-32  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  41.01 
 
 
579 aa  139  7.999999999999999e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_010524  Lcho_0047  histidine kinase  36.88 
 
 
508 aa  139  1e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_1120  GAF sensor signal transduction histidine kinase  34.55 
 
 
577 aa  139  1e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  46.15 
 
 
522 aa  139  1e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_010814  Glov_0589  multi-sensor signal transduction histidine kinase  37.34 
 
 
581 aa  139  1e-31  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1272  PAS/PAC sensor signal transduction histidine kinase  37.39 
 
 
584 aa  139  1e-31  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  39.11 
 
 
523 aa  138  2e-31  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_007520  Tcr_2180  PAS/PAC sensor hybrid histidine kinase  37.26 
 
 
1410 aa  138  2e-31  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  44.59 
 
 
337 aa  138  2e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3552  Cache sensor hybrid histidine kinase  33.58 
 
 
970 aa  138  2e-31  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  43.26 
 
 
520 aa  138  2e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_144  sensor kinase, two-component system, OmpR family  37.93 
 
 
581 aa  138  2e-31  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1078  PAS/PAC sensor signal transduction histidine kinase  36.44 
 
 
458 aa  137  3.0000000000000003e-31  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0234  PAS/PAC sensor signal transduction histidine kinase  34.35 
 
 
581 aa  137  3.0000000000000003e-31  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  45.7 
 
 
767 aa  137  3.0000000000000003e-31  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.788805 
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  36.89 
 
 
740 aa  137  4e-31  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  37.44 
 
 
513 aa  137  4e-31  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1968  multi-sensor hybrid histidine kinase  34.24 
 
 
846 aa  137  4e-31  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  45.33 
 
 
550 aa  137  4e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0538  histidine kinase  35.06 
 
 
550 aa  137  4e-31  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  37.44 
 
 
513 aa  137  4e-31  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  43.45 
 
 
525 aa  137  4e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  37.44 
 
 
513 aa  137  5e-31  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_013385  Adeg_0645  integral membrane sensor signal transduction histidine kinase  35.71 
 
 
467 aa  137  5e-31  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3831  GAF sensor hybrid histidine kinase  35 
 
 
1177 aa  136  6.0000000000000005e-31  Delftia acidovorans SPH-1  Bacteria  normal  0.195944  normal  0.0220401 
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  38.12 
 
 
523 aa  136  6.0000000000000005e-31  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  36.36 
 
 
513 aa  136  6.0000000000000005e-31  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  38.12 
 
 
523 aa  136  6.0000000000000005e-31  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_011138  MADE_01215  Response regulator  35.96 
 
 
509 aa  136  6.0000000000000005e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  28.17 
 
 
1691 aa  136  6.0000000000000005e-31  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0007  sensory box histidine kinase  34.6 
 
 
762 aa  136  7.000000000000001e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  43.51 
 
 
580 aa  136  7.000000000000001e-31  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  39.33 
 
 
525 aa  136  7.000000000000001e-31  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  38.12 
 
 
523 aa  135  9e-31  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  38.12 
 
 
523 aa  136  9e-31  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_011831  Cagg_2625  multi-sensor signal transduction histidine kinase  34.26 
 
 
875 aa  135  9.999999999999999e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1884  response regulator receiver sensor signal transduction histidine kinase  33.93 
 
 
389 aa  135  9.999999999999999e-31  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.329348  normal 
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  38.12 
 
 
523 aa  135  9.999999999999999e-31  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_004347  SO_2366  response regulator  37.08 
 
 
525 aa  135  1.9999999999999998e-30  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007517  Gmet_1707  PAS/PAC sensor hybrid histidine kinase  33.59 
 
 
1313 aa  135  1.9999999999999998e-30  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02571  response regulator  38.81 
 
 
521 aa  135  1.9999999999999998e-30  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2117  histidine kinase  39.62 
 
 
631 aa  135  1.9999999999999998e-30  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  42.77 
 
 
582 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  39.62 
 
 
593 aa  135  1.9999999999999998e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_4466  histidine kinase  32.51 
 
 
464 aa  134  1.9999999999999998e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.734574  normal 
 
 
-
 
NC_007413  Ava_0238  multi-component transcriptional regulator  36.29 
 
 
1629 aa  134  3e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  38.36 
 
 
613 aa  134  3e-30  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  40.37 
 
 
527 aa  134  3e-30  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  43.51 
 
 
581 aa  134  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2689  multi-sensor signal transduction histidine kinase  33.82 
 
 
646 aa  134  3.9999999999999996e-30  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.119288 
 
 
-
 
NC_002936  DET0136  sensory box sensor histidine kinase  37.34 
 
 
581 aa  133  5e-30  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2420  PAS/PAC sensor hybrid histidine kinase  32.65 
 
 
933 aa  133  5e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  0.42243  hitchhiker  0.0000359369 
 
 
-
 
NC_011984  Avi_9103  multi-sensor hybrid histidine kinase  36.11 
 
 
1145 aa  133  5e-30  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  39.23 
 
 
580 aa  133  5e-30  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_008463  PA14_43670  putative sensor/response regulator hybrid  35.77 
 
 
651 aa  133  5e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  41.04 
 
 
523 aa  133  6e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_008609  Ppro_3156  multi-sensor signal transduction histidine kinase  35.93 
 
 
587 aa  133  6e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  0.619386  n/a   
 
 
-
 
NC_011146  Gbem_0800  histidine kinase  32.44 
 
 
882 aa  133  6.999999999999999e-30  Geobacter bemidjiensis Bem  Bacteria  normal  0.127646  n/a   
 
 
-
 
NC_009634  Mevan_0613  integral membrane sensor signal transduction histidine kinase  34.21 
 
 
641 aa  133  6.999999999999999e-30  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_002939  GSU1101  sensory box histidine kinase  36.24 
 
 
537 aa  132  7.999999999999999e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3663  putative sensor/response regulator hybrid  35.77 
 
 
651 aa  132  7.999999999999999e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  0.800386  n/a   
 
 
-
 
NC_007908  Rfer_3548  PAS/PAC sensor hybrid histidine kinase  32.65 
 
 
1007 aa  132  7.999999999999999e-30  Rhodoferax ferrireducens T118  Bacteria  normal  0.508984  n/a   
 
 
-
 
NC_011830  Dhaf_1284  histidine kinase  37.83 
 
 
560 aa  132  7.999999999999999e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0983353  n/a   
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  40.65 
 
 
512 aa  132  7.999999999999999e-30  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_010511  M446_0210  PAS/PAC sensor hybrid histidine kinase  36.33 
 
 
708 aa  132  9e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.62826 
 
 
-
 
NC_011145  AnaeK_4457  histidine kinase  31.34 
 
 
461 aa  132  9e-30  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4476  histidine kinase  31.34 
 
 
461 aa  132  1.0000000000000001e-29  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0860551  n/a   
 
 
-
 
NC_008789  Hhal_0647  multi-sensor hybrid histidine kinase  36.33 
 
 
790 aa  132  1.0000000000000001e-29  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0664  ATP-binding region, ATPase-like protein  31.65 
 
 
853 aa  132  1.0000000000000001e-29  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  35.18 
 
 
515 aa  132  1.0000000000000001e-29  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  42.57 
 
 
529 aa  132  1.0000000000000001e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  40.79 
 
 
517 aa  132  1.0000000000000001e-29  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_007355  Mbar_A1052  sensory transduction histidine kinase  36.15 
 
 
1046 aa  131  2.0000000000000002e-29  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007520  Tcr_1913  PAS/PAC sensor signal transduction histidine kinase  32.18 
 
 
1118 aa  131  2.0000000000000002e-29  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
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