Gene DET0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0136 
Symbol 
ID3230498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp133577 
End bp135322 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content53% 
IMG OID637119704 
Productsensory box sensor histidine kinase 
Protein accessionYP_180886 
Protein GI57235028 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGAA GCCTTAAATG GCGTTTAATA AGCCTGTTTT GCCTGCTTAT TGCCGCTAGC 
GTGGGTCTGC TCAGCATTTT CCTGTCCAAT CATCTGGAGA ACTCTTATCT GGACAATTTG
CAGTCCCGCC TTGTTCAGGA AGCCACGCTG CTTTCAGAGA TAGTGCCGGA GCATATTTCT
GAAGACCCGG ACAGTTTTGA TGCTTATATT AAGGAACTGG GAGCCTCGCT GGATATACGG
CTGACTGTTA TAGACCCCGG CGGTCAGGTG CTGGCAGATT CACTCCAGTC ACCCTCGGAC
ATGGAGAATC ACTCTACCAG AGTTGAGTTT ATTGATGCTT TAAAAAACGG CCTTGGCACC
AGTGTTCATC AGTCTGCCAG TCTGGGATAT GAAATGCTGT ACGTGGCTAT CCCGGTTAAA
AGCGGGACAG AGGTACTGGC GGTAGTGCGG GTGGCCTTGC CGGTAGAAGA AGTATACGCG
GCGGTGGGGG ATGTAGACCG GACTATTTTG CTGAGTGCCT TAATAAGCAT ACTGGCGGCC
GGGCTTTTAG CAGTTTGGGT AGCGGCCAGC CTGACCCGCC CGATTAAGGA ACTCACCGCT
ATTGCCCGGC GTATTGCCCG GGGGCAGATG GATGCCGTTC AGATAGAGGT AAGCGGCAAA
GGTGAAATGG AAGAACTGGC CCATGCCTTC CGCCTGATGA CGGAACGCCT GCGTGACAGC
ATAAATGCAG TCAGCTCCGA GCGTGACCGC CTGTCAGCGG TACTGGAACG CATGGGTGAC
GGCATTTTCC TGCTGGACTG CGAAGGCACT ATAAGCCTTT TAAACCCGGC TGCCGAGCGG
ATATTTAAAC TGGAAGCCGA ACATGTAATA GGCCACAGCT TTGTGGAAGC AATACGTGAC
CATGAAATCC ACTCTATTTT TGAGCATTCC AAATCCTCCG GCAAGCAGGA GATGGGTTTT
GTAGAGCTTG CCTCCGGCAG GCGTTTTCTG GGTATTATTG CTACCCCGCT GGTCAGCCAG
TCCGGTTATC TGGTGCTGGT GCAGGACCTT TCAGAGCTTC GGCGGCTGGA GAAGGTAAGG
CGGGATTTTG TAGCCAATAT TTCCCACGAA TTACGCACCC CTATCAGTTC CCTGAAACTG
CTGACTGAAA CCTTGCAGGA GGGGGCGGCA TCTGATGCTG CGGTTGCGGC CGGGTTTATT
GAAAAAATCC ACCTTGAGGT AGATAAACTG GCCCAGCTGG TTACCGAACT GAGTGACCTT
TCCGCTATAG AAAGCGGCCA GGCGGTTTTA AACCTCCAGC CGGGAGATAT TTCCACAGCT
ATAAAACTGG CAGCCGCCAG GCTTAGCCCC CAGGCGGAAC GGGCAGGTAT AAGCCTTGGG
GTAGAACTGC CCGAAACCCT GCCGCAGGTA AAGCTGGACG AAAACCGGAT TGAACAAGTG
CTGGTAAATC TGGTGCATAA TGCCATCAAG TTTACCCCCA AGGGCGGCCG GATAAAGATT
GGTGCCCGCA CCCAGGGGCA GATACTGGTA GTATATGTAT CTGACAGCGG CATAGGTATA
CCCGAAGATG ATTTGACCAG AGTATTTGAG CGTTTTTACA AAGTGGATAA AGCCCGTTCC
GGCGGCGGTA CAGGTTTGGG ACTGGCTATT TCCAAGCATA TAGTGCAGGC ACACGGCGGG
AACATCTGGG CAGAAAGCCG CTACGGCAAG GGGGCAACCT TCAGTTTCAG CCTGCCGCTT
GGCTGA
 
Protein sequence
MARSLKWRLI SLFCLLIAAS VGLLSIFLSN HLENSYLDNL QSRLVQEATL LSEIVPEHIS 
EDPDSFDAYI KELGASLDIR LTVIDPGGQV LADSLQSPSD MENHSTRVEF IDALKNGLGT
SVHQSASLGY EMLYVAIPVK SGTEVLAVVR VALPVEEVYA AVGDVDRTIL LSALISILAA
GLLAVWVAAS LTRPIKELTA IARRIARGQM DAVQIEVSGK GEMEELAHAF RLMTERLRDS
INAVSSERDR LSAVLERMGD GIFLLDCEGT ISLLNPAAER IFKLEAEHVI GHSFVEAIRD
HEIHSIFEHS KSSGKQEMGF VELASGRRFL GIIATPLVSQ SGYLVLVQDL SELRRLEKVR
RDFVANISHE LRTPISSLKL LTETLQEGAA SDAAVAAGFI EKIHLEVDKL AQLVTELSDL
SAIESGQAVL NLQPGDISTA IKLAAARLSP QAERAGISLG VELPETLPQV KLDENRIEQV
LVNLVHNAIK FTPKGGRIKI GARTQGQILV VYVSDSGIGI PEDDLTRVFE RFYKVDKARS
GGGTGLGLAI SKHIVQAHGG NIWAESRYGK GATFSFSLPL G