| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00620 |
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| Symbol | |
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| ID | 6305772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2307687 |
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| End bp | 2311082 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642639539 |
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| Product | two-component system sensor protein |
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| Protein accession | YP_001913404 |
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| Protein GI | 188576475 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.282271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCG CCATGTCGCC GTTGACCGGC TTGCTGCCGG AGACAAGCGA AACTGCCGCA
TTGCTGAGCG CATCCGCGCA CGCCGCGGAG GCCCTGCTGC GCGAAAGCCC CGCACTGCGC
ACAGCATTGT CGGTCTGCTT GCATGCGCAG GTTCCGATGC TGCTGGTCTG GGGCCGCGAT
GCCCGCTGCA TCTACAACGA TGCCTGCATT GCGGTGCTGG GGCCGCGCCA TCCGGCGGCG
TTCGGGCAGC CGCTTGCGGC GCTGACGAAC GCATCCGTTG GCGATGGCGC GCAAGCGACT
AAAACGACCC TGGATCTGGC GACCTGGTCA TGCAGCCCGG TGCTGCAATC TGGCAAGCGG
TTGGGTGCCT TGTACGTAAG CGTTGCGGCT TCAACCGCTG GCGTCAGCGG CCATCATCAC
AGCGACTGTC ACGACAGCTT TTTATTGATG CTGGAGGACG CGCTACAGCA TGTGTCCGAT
CCGCGACGGA TCATCGATAC CAGCATGCGC TTGCTCGGTG AGCATCTGCA CGCGAACCGT
TGCGCATTTG GCCTGGTCGC CGCCGATGGC AGCACCCTGC ATGTGATCAG CGACCATGTG
CAGGACATGC CGAGCCTGCA AGGCGACTTT CCGCTGGAGG CGGCGCAGGG CCTGCGCGAT
GCTTTGCTGG AAAATCGTCC CTGGTTCACC ACCGATACCA TGACACCGGG TGCGCCGGAC
TATGTGGCCG AGCAGTACCG CCACTCTGGC CTGCGTGCCT CGCTGGCCAT TCCATTGCAC
AAGCACGGCC GCCTGGTGGC AGCGATCGGC GTGCATCAGC GTGCACCGCG GCACTGGCTG
TCGACCGAGA TCGAACTGGT ACGATTGGTG GCCGCACGCT GCTGGGAGTC GATGCAACGG
GCCAAAGCGC AGCAGCAACT GGCCGGCAAC GAAGCGCGCC TGCGTCGCCT CGCCAACACG
CTGCCGCAGA TCATCTTCAT TGCCGATCCG GATGGACGAC CGCACTACTT CAACCAGCGC
TGGTACGAAT ACACCGGCCT GGATCCTTCC AACAACGAAG ATGCCGCGTG GCACCGGGCA
CACACTGCCG ACGGCCTACG CTTGTCCGCG CAAGCCTGGA CACTGGCACT GAACGGCAAG
CGTGCATTCG AGATGGAGTG CGAACTGCTG CGTCACGATG GGCAGTCGCG TTGGCATCTG
GCGCGCGCCC TACCGGTGCG CGGCGACGAT GGCAGTATCA GCGAGTGGAT TGGCACCTAC
ACCGATATCC ATGACCGGCG CGCGTTCGAA CAGCAATTGC GCGAAAGCGA AGTGCGCTTC
CGTGCGCTCT GCGAAACCGT GCCGGCGATG ATCTGGATGT CCGACGCGCA AGGTGATTGC
GTGTACTGGA ATCCACGCTG GTACGACTTC ACCGGACAGG GCGAAGACCA GGCCCTGGAT
CAGGGTTGGT GGGATGTGAT GCATCCCGAT GACGCGGCCC GCGTGCGACA TGCCTTCGAA
CAAGCACTCA ATCAACGCGG CGAATTCATC GCCGAATACC GCGTGCGCCG CCACGATGGG
CAATACCGTT GGTGCATCAA CACCGCATCG CCGCACTTCG CCAGCGACGG GCGTTTTCTT
GGACACATCG GCTCGCTCAC CGATATCTCC GAACGCAAGC ACATCGAAGA TGCCACTGCC
TCGGACCGGG CGATCCTGGG TTTGATCACC ACCGGCGCAC CATTGCCGGT GGTGCTGGAT
GCGATTGCGT TAAGCGTAGA GGCGCGCAGT GAAATCCTGC TGTACTGCTC GGTGATGGTG
CGCGATGAGG TCCGCCACAC CTTGAGCTTC GGCTCGGCAG CACATTTTCC AATCGAATAC
CGCGGGCACT TCGCGCCGTC GCCGATCGGG GAGGATGGCC CGCCCTGCGC GCTTTCGGCG
CATCTGGGCC TTCAGGTGAT CTGTGCGGAC ATCCGCGCCG ATGCCAGCTT TGCCAATCAC
CACGCGATCT CGGCAGCAAT GGGCATCGCC GCGTGTTGCA TCACTCCGAT CCTGGACAGC
AATGGGCAAG TCCTGGGCAC GCTCAACATT TATTACGACC GCCCTCACCT GCCCTCGTTA
CGCGAGCAGG CGATGGCGCG CTCGGCCTCG CATCTGGCCG GCATCGTGAT CGAACGCACC
CGCGTGGATG CCAAGCTCAA GTTGTCGTTG CAGGCCGAAA CCGCCGCACG CGCGCAAGCC
GAGCATGCCA GCCGGGTCAA GGACGAATTC CTTGCCACGC TCAGCCACGA GTTGCGCACG
CCACTCAACG CGATTCTGGG TTGGTCGCGA TTGATGCAAT CCGAGATGAC GGAGCCGACT
CATCTGGGCC GGGGTCTGGT GATTATCGAG CGCAGTGCGC GTGCGCAGAC GCAGATCATC
GACGACCTTT TGGACATGAG CGCGATTCTG TCCGGCAAGA TCCGTCTGCA GGCGGAGCAT
TTCGACATCG CCGGACTGGT GCGCAGCACG CTGGAACTGA TGCAGCCGAC TGCCCTGGCG
CGCGAGATCG CGCTGGAATT GGACGCGCCT TGCGATGGCG AATTGTGGTT CTTCGGCGAT
GCCGGGCGCC TGCAGCAGGT GCTGACAAAC CTACTCAGCA ATGCGCTTAA GTTCACCCCG
GTCGGCGGCA CGGTGCGGGT GGCGATGGAC ATCGAAGACG AGCGCTTGCG CCTGTGCGTA
CAGGACACCG GCATCGGCAT TGCGGCGGAT TTCCTACCGC ATGTCTTCGA CCGTTTTCGG
CAGGCCGATG CCGGCACGAC ACGCCGCGTG GGCGGCCTAG GATTGGGCTT GTCGATCTCG
CGTCAGTTGG TGGATCTGCA TGGCGGCAGC CTGGGTGCGT CCAGCGCAGG CGAAGGCCAG
GGTGCCCTGT TCACCATCGT GTTGCCGTTC CAGCACGGGG TCAGCGACTT ACGCCCTGTG
TCGGCAGCCA CCGCACGCGT GGGCGCGTTG CCGGAGGAGT GCCGTCACCG CCTGGCTGGC
GTGCGCCTGT TGCTGGTCGA CGACGATCAG GATTCGCGCG AAGCAGTGAT GCAGTTCCTG
ACGCTGGCCG GTGCGCAGGT GCAGGCTGCG GGCTCGGTGG ACGCGGCCGA GCAATGTTTG
GCGAATGCGT ACTTCGATGT CTTGGTGAGC GATATCGCGA TGCCATTGCG CGATGGCTAC
GACCTGATCC GCACGGTACG TTCGGGCCGC GCCGATCTGC CACGGCAGAT TCCGGCCATC
GCACTCACCG CGTATGTCCG CGAAGAAGAT CGCGACCGCG CGGTGGTGGC CGGCTTCGAT
GCGCACATGG GCAAACCGGT GGAACCGCCC GGCCTGGTCG ATCTGATCGA ACGCTTGATC
TTGCCGACGC GTGCGGTGCG GGATGCGGTG GAATAG
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| Protein sequence | MDIAMSPLTG LLPETSETAA LLSASAHAAE ALLRESPALR TALSVCLHAQ VPMLLVWGRD
ARCIYNDACI AVLGPRHPAA FGQPLAALTN ASVGDGAQAT KTTLDLATWS CSPVLQSGKR
LGALYVSVAA STAGVSGHHH SDCHDSFLLM LEDALQHVSD PRRIIDTSMR LLGEHLHANR
CAFGLVAADG STLHVISDHV QDMPSLQGDF PLEAAQGLRD ALLENRPWFT TDTMTPGAPD
YVAEQYRHSG LRASLAIPLH KHGRLVAAIG VHQRAPRHWL STEIELVRLV AARCWESMQR
AKAQQQLAGN EARLRRLANT LPQIIFIADP DGRPHYFNQR WYEYTGLDPS NNEDAAWHRA
HTADGLRLSA QAWTLALNGK RAFEMECELL RHDGQSRWHL ARALPVRGDD GSISEWIGTY
TDIHDRRAFE QQLRESEVRF RALCETVPAM IWMSDAQGDC VYWNPRWYDF TGQGEDQALD
QGWWDVMHPD DAARVRHAFE QALNQRGEFI AEYRVRRHDG QYRWCINTAS PHFASDGRFL
GHIGSLTDIS ERKHIEDATA SDRAILGLIT TGAPLPVVLD AIALSVEARS EILLYCSVMV
RDEVRHTLSF GSAAHFPIEY RGHFAPSPIG EDGPPCALSA HLGLQVICAD IRADASFANH
HAISAAMGIA ACCITPILDS NGQVLGTLNI YYDRPHLPSL REQAMARSAS HLAGIVIERT
RVDAKLKLSL QAETAARAQA EHASRVKDEF LATLSHELRT PLNAILGWSR LMQSEMTEPT
HLGRGLVIIE RSARAQTQII DDLLDMSAIL SGKIRLQAEH FDIAGLVRST LELMQPTALA
REIALELDAP CDGELWFFGD AGRLQQVLTN LLSNALKFTP VGGTVRVAMD IEDERLRLCV
QDTGIGIAAD FLPHVFDRFR QADAGTTRRV GGLGLGLSIS RQLVDLHGGS LGASSAGEGQ
GALFTIVLPF QHGVSDLRPV SAATARVGAL PEECRHRLAG VRLLLVDDDQ DSREAVMQFL
TLAGAQVQAA GSVDAAEQCL ANAYFDVLVS DIAMPLRDGY DLIRTVRSGR ADLPRQIPAI
ALTAYVREED RDRAVVAGFD AHMGKPVEPP GLVDLIERLI LPTRAVRDAV E
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