| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1217 |
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| Symbol | |
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| ID | 4481210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1515849 |
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| End bp | 1518260 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639721960 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_865134 |
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| Protein GI | 117924517 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.503931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0882093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCGT CCCGCTTTGT GCAGGCCATC AACCCAACAG GGGCCATCCC AAGGCAACCC
TCTATGAGAG CAACGCACCC TAAGCCAAAA ATATTAATCG TAGACGACAA ACCTGCGAAT
TTAATGGCGC TGCGCCGATT ACTAAAAAAC ACCCACGCCG AATTGATTGA AGCCGAATCG
GGTAATGAAG CCTTGGGGCT TATGCTGGAA CATGAGTTGG CGTTGATGCT GTTGGATGTG
GATATGCCCG GTATGGATGG TTTTGAGGTC AGCCGCATGG CCAGTGGCTT GGACCGCACC
AGCAATGTGC CGATCATTTT GATTACGGCA GCTTATAAGG ACTATTCACA CCGTATTAAA
GGGTATCAAG CGGGGGCTAT CGACTATATT GAAAAGCCTA TTGATGACCG CATATTAAAT
GCCAAAGTTG CCATTTTTCT TAATCTTTAC AATGCTCACA GAGAATCTGA ACAGCTTCGT
CAGGATTTAA CCCTTAATCA AGAACGTTTG GAGTTGGCTT TAGAAGGTGC CAATGAAGGA
TTGTGGGATT GGAATATACT CAGCAACCAG GTCTACTATA GCCCCCGTTG GATCACCATG
CTCGGCTATG CCACAAATGA GGTCAATCAA GATTTTAGCA CATGGAAGAC GCTTATTCAT
CCAGATGATT TTGAATCGGC ATTGGCCTGT TTAGAGCGCC ATTTTACCAC GCCAGAGGAG
CCCTATCGAG CCGAGTTTCG CATGCGCACC AAGCAGGGCG GTTGGTGCTG GATTCTGGCA
CGGGGCAAAG TGGTGGCGCG CACCGCCGAT GGTCAACCCC ACCGCATGGT GGGCGCCCAT
CAAGATATTA GCCAGCGCAA ACAGTTAGAG GCTGACCTAT TGGCCGCTAA AACGGAAGCC
GAACAGGCCA ACCAAGCCAA AAGCCGTTTT TTGGCCAATA TGAGCCATGA GATCCGCACC
CCCATGAATA CCATTTTAGG TATGGGTGAG ATATTGCTCA ACGCACCCAA TTTAACCCCT
AAGCAGCACC GTTATTTGAG TATCTCTCAG CGAGCTGGGG ATACTTTATT GGGGTTGATC
AATGATATTT TGGATTTATC CAAAATTGAA GCGGGGGAAC TTCACCTTGA ACATACCCTT
TTTGCGCTAC ATGATGAACT TAAGAGCCTC ATTACCATGC TCCGCCCCAT GGCACGGGAT
AAAGGGTTAT CCATGCAGTG TGTCATTGAT CCGCAACTCC CCACCCATGT GCATGGAGAC
CCGCAACGAT TTCGCCAGAT TGTGCTCAAC CTATTGAGCA ATGCCCTTAA GTTTACGGAT
CAAGGCAGTA TTACCCTGCA CGCCAAACCC ATAGAGACCG GGCGCCTACA GTTTACGGTA
AGCGACACCG GCATCGGCAT GCCGGAACAG GTCATCACCA AAATTTTCCG CCCCTTTGTA
CAAGCCGAGG CCAACACCAC CCGCCGCTTT GGTGGCACAG GCTTGGGGCT AAGTATCTGC
CGTCAACTGG TCACAATGAT GCACGGTGAG ATCTATGCCA ACAGCCAAGT TGGCGAGGGC
AGCCAATTTA TTTTTGAAAT TGAGCTCCCT GCGGCCAATT CCGAGACGGT TAAACAAGAG
CGGCTCTCTC CACCAACAAA ACAAAATATC CCTATGCGGT TGCTTTTGGT GGATGATATG
GAGGACAACC GGCTATTGGT TAAAGCCTTT TTAGAAGGCA CCCCCCACCA AATTGTTGAG
GCGGAGGATG GTCTGGACGC ATTGGAAAAA TCTCAACAAA GCCAATTTGA CCTTATCCTC
ATGGATGGCA TGATGCCCAA AATGGATGGT TTGGAAGCCA CCCGCCGCAT TCGCGCCAGG
GAGAGCGAAC ATAACCTTAC TCCTGTTACC ATTGTCGCTT TAACCGCTAA TGCCATGCCT
CAGGATGTCG CCGACAGCCT CGCAGCGGGT AGCGACTACC ATATGGCCAA ACCCATACGT
CGCGCCAAAC TGTTGCAGTT ACTGGCGAGC ATTGCCAACG AACGGCGTCT CTTCTCCCAT
GAGGAAGTAA AACAGACCAC CACCCTCACC TCTGTCGAGA CCATTGCTGC GGACATTCTC
GATGCATTAG CCAATGATGT CGGTTCAGGC TATCGGCAAT CCATTTTGCG TTTCTACAGC
ACACTACCTG CTCGCGTGGC GCAGCTTACC GCGCACATAG GATCTGAAGC GGATAGCGTG
CTTATCGAGG CACAAGGTCT CCAGCAGGAT GCCTCCTATT TTGGTGCCCA TAAACTTGCC
CATTTATGTA CGCAGATTGC CCAGATGGCC CGTACCAAGC AGCCAAGAGA GATGATCGCC
AGCCTCTGCC CACTGTTGCA GCAGGCTTTG CAAACCATCG AACGCCGATT GACCAACGAG
GGCTATTTTT AG
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| Protein sequence | MGASRFVQAI NPTGAIPRQP SMRATHPKPK ILIVDDKPAN LMALRRLLKN THAELIEAES
GNEALGLMLE HELALMLLDV DMPGMDGFEV SRMASGLDRT SNVPIILITA AYKDYSHRIK
GYQAGAIDYI EKPIDDRILN AKVAIFLNLY NAHRESEQLR QDLTLNQERL ELALEGANEG
LWDWNILSNQ VYYSPRWITM LGYATNEVNQ DFSTWKTLIH PDDFESALAC LERHFTTPEE
PYRAEFRMRT KQGGWCWILA RGKVVARTAD GQPHRMVGAH QDISQRKQLE ADLLAAKTEA
EQANQAKSRF LANMSHEIRT PMNTILGMGE ILLNAPNLTP KQHRYLSISQ RAGDTLLGLI
NDILDLSKIE AGELHLEHTL FALHDELKSL ITMLRPMARD KGLSMQCVID PQLPTHVHGD
PQRFRQIVLN LLSNALKFTD QGSITLHAKP IETGRLQFTV SDTGIGMPEQ VITKIFRPFV
QAEANTTRRF GGTGLGLSIC RQLVTMMHGE IYANSQVGEG SQFIFEIELP AANSETVKQE
RLSPPTKQNI PMRLLLVDDM EDNRLLVKAF LEGTPHQIVE AEDGLDALEK SQQSQFDLIL
MDGMMPKMDG LEATRRIRAR ESEHNLTPVT IVALTANAMP QDVADSLAAG SDYHMAKPIR
RAKLLQLLAS IANERRLFSH EEVKQTTTLT SVETIAADIL DALANDVGSG YRQSILRFYS
TLPARVAQLT AHIGSEADSV LIEAQGLQQD ASYFGAHKLA HLCTQIAQMA RTKQPREMIA
SLCPLLQQAL QTIERRLTNE GYF
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