| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2180 |
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| Symbol | |
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| ID | 3761871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2400483 |
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| End bp | 2404715 |
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| Gene Length | 4233 bp |
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| Protein Length | 1410 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637786929 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_392442 |
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| Protein GI | 78486517 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTAAAAC ATAGCCTTTC AGCACTCCTT CTGCTGAGCG CATTATTACC TTTCTCAGCG
CAAGCCCTCA CGCTTAACTC CTCCGAACAA CAATGGATTA AAGACCACCC CCAAATCACG
CTTGGCTCAG ACTATAACTG GCCACCGTAT GACTTCAAAG ACAGCGCTGG AAAGCATAAT
GGAATCTCGG CAGATATCTT AGACCGCATT CGTCAAATAA CCGGATTGAA GATAAAGGTC
CGAAGTGGCG TCTGGTCGAC CATCTTGGAA CAAGCCGAAC AAGGAACCCT AGATGGATTA
GCGTGTGCGG TTAAAACCCC TGATCGAGCC GAACACCTTT ACTTCACAGC GCCATACACC
AGCATGCCTT TGGGCATTTT TATGCAAGAT AAAAGCACGT CGACATCAAT TAAGACCATG
GATGATTTAA CCACACAAAC AGTCACCATT AATCGCGACT CTTATATGCA CGAATGGTTA
AAACAAAACT ATCCTCATCT CAAACTGTAT CTGGTCAACT CAAATGCCGA AGCGCTTGAA
GCTGTGTCTT TCGGAAAGGC AAACGTTTAC ATCGGCAATA TGGCGGTGGC AACTTATCTG
ATTAAAAAGA ATTATCTCAC CAACATCCAA GCCGTCGCTA AAATCAATCA TTTCAAAACA
GATACCGCCA TTGCGATACA TAAAGACAAG CCTATCTTAT TCGGCATCAT CAAGAAAGCG
CTCAAAGAAA TTTCTCAAAA AGAGCGAAAT ACCATTCTTG AAAAATGGTT TATCAAATCG
AAAACGACGT ACATTGATCT GTCTAATCAG GAAATCGCTT GGATAAAAGC ACACCCTGTC
ATCAAAGTAG CCGGAGAACC GGACTGGGCT CCGTTTGATT TTGTGGCTGA CAATACCTAT
CAAGGGATTG CCAACGACTA TCTGAACCTG ATTGCACAAA AAACCGGCCT GAACTTCCAT
ATTGATATTC ACTCTTGGGA ACAGAACCTG ACCCTGCTGA AAAAACAGCA AGTCGACGTG
CTGCCCGCGG CCTATTTTTC TGCAGAACGA ACCTCATATG CCAAGTTTAC AACGCCTTAT
TACAAACCCT TAACCTATTT CTTTGTTCGA CATGACTTAA AGGCTTCGTC TCTAAATGAC
TTAGAAAATA CGACCATTGC CATGCCGAAA GGGTATCTGC ACATCGACTT CCTCAAGCAA
CGGTTTCCTA ACATAACGAT ACTGGAAACC GATACACTGA ATGAAGCGAT CAATGCCGTT
ATTCAGAATA AAGCCCAAGT CTTATATGAA AACTATGCCG TACTATCCTA TATTTTGTCT
CAATCAGGCA TCAACACGAT TAAACCCTTA GCGCCGGCCA AGCAAGCGAA CCAATCCCTT
CACTTCATGA TACGCGACTC CGCCCCCGAG CTCGCCAGCA TCATGAATAA AGCTTTAGCC
AGCATTACCC CGCAAGAACG TAAAGACATC GAAGAAAGAT GGCTGACAAT TGCGCCGAAC
AAGATCAACA TTACGCTGAC ACCAGCCGAA CAAAACTGGC TAAATCAACA TGCACAAGTC
AGCTTTACAG GCTACCCAGA TCATTTGCCT TATGAAGGCT TCAAAAGCAA TGCAAATCAA
CCGATCCAGC ATCAAGGCAT TGTATCGGAC TTTATCCACT CCCTGGAATC CCACTTACCT
TTGCAATTCA TTCCTAGAGC TTATAAAAGT TGGCCTGACA CCTTAAAAGC CATTCATCAA
ACGCCCGTTG ATATTATCTC AGCCGAAATA GACACCCCTG AACTACTGGC ACAGTACCGT
CCAATCATTC CGTATCTGAC GACACCGATG GTCATTGTGA TGAAAAATCA AGACACCTTT
GTCAATACAT TGCGCCAATT AACGACAGAA ACCATCGCTT TAGTCAGCAA CGACGCCACC
TCAGAAAAAC TTTTAAAACA ATACCCCAAC CAGCATTTTA AAACCTGGCC AAATGCTAAA
AGTGTCCTAG AAGCGGTGGC CTTCAATAAA GCGGATGCCG CCATACTGTC ACTCGCCAAA
GCCAGTTATT TAATCAAACA AAACCACTAC ACCTCGCTAA AGATCGTCGG AAAAACCGAC
GTTCAAAAAC AATTTACTTT ATTCGTCAAC AAACGCTATC CAGAGCTGTT CTCCATCCTG
CAAAAATCGA TGCCCGCAAT CACGGAAGAA CACGGTTCCG GTATTTTAAG TCAGTGGACT
AAAATTAAGT TTGCCAGCAA ATTTGATTAC GCTTTATTCT TCCAAATGTT CAGTTTTTTA
CTGGTGGTGA TTGGAATCAT ATTTTTTTGG AATCGACGTC TCACCAAAGA AGTCAAACAG
CGCTTACAAG CTGAAAAACG ACTAAAAGAA AACGAAACAC AACTGCAAGG GCTGATTGAC
AGCATCCCGC TGATGATTAT GGTCACCAAT CATCAGGGCA AAATATTATC GGCCAACAGA
CAAACGCTGA AAAATTATCA GCTCAATTTC CAAGAACTAT CGGAATTAAA CTCAACCACC
TTTTATTCTG ACCCCGACGA TCGCCAGCAA ATTCTCAATG CACTGCAAGC CGGCGAACAA
ATTCACCAGA AAATCATTTC AATGAAAGAT GCCGACGGCA TTCCGCGCAA AATGATGCTG
TCGGTGCTGC CGATTCATTT CAACCAACAA CCCGCCAATC TGAGCATCGC CATCGACTTG
ACCGAGCGCA TTCAGTTTGA AAAAGAGCTT CAACAGGCAA AAGAACAGGC AGAATCGGCC
AGCCAGACCA AGTCACAGTT TTTAGCGAAC ATGAGTCACG AAATTCGAAC CCCAATGAAT
GCCATTATCG GCTTTACCGA ATTGCTGAAT GAACAAGTGA CCGAACCTCG GTTAAAACGG
TATATCCGCA CCATTCAAGC GGCAGGAAAA ACCCTGCTAA CCTTAATCAA CGACATCCTC
GACTTATCAA AAATTGAAGC CGGCAAAATG GATTTGGACA AGAAAGCCGT CAACCCGCAC
AGCTTGTTTG ACGAAATTGG ACAAATCTTC ATGATCAACA TTCAACGCAA AGGACTCGAT
TTCTTGGTCG ACATCGATAA AACCCTACCA GAAGGTCTGT TGTTAGACGG TGTTCGTCTC
CGGCAAATAC TGTTCAACCT ATTGGGTAAT GCCGTTAAGT TTACCGAGCA GGGTTATGTC
AAATTGAAAG TCTCCGCCTG TGATGTGGAC GAACATCACA GCAAGCTGGA TATTCTGATT
CAAGTTTCCG ATACCGGTAT CGGCATCCCT GAAGATCAAC AAGCGCGTAT TTTTAACGCC
TTTGAACAAC GTGAAAATCA AGACGTACAA AAATTTGGCG GCACCGGATT AGGGTTAGCG
ATCACACAAC GTCTGGTTAA TATGATGGGA GGGGATATTT GGGTTGAAAG CACTCCCGGC
CAAGGCACCA CCTTCAACCT GTTAATTCAT CATGTCGATA TTTCAGCCAC CAACCAAAGT
GACCAACCCA ACAGTGATGA ACGACCAGTA CCGCAGCTAA TTGAATTTCA CCCAACCACA
ATCCTGGTGG TGGACGACAT TGACGACAAC CGCGCCTTGA TCAAACAAAA CTTCGTCGAC
ACCGACGTAA CGGTCTATGA AGCTCAAAAT GGCGAAGAGG CCATTAACTG CTTCCATTCT
GAAAAAGGCA TCTCATTGAT TCTGATGGAT TTACGAATGC CGATCATGAA TGGATATCAA
GCGGCTGAGA TAATCAAACA AAAGTCTCCC AGCACGCCGA TTGTCGCGTT AACCGCTTCT
GTCATGACCG AAACAGCTGA CGCACCTAAA CGACAGCACT TTGATGACTA TCTGCGTAAG
CCGGTCTTTA AAGCGGATTT ATTTAATATT CTGAAAAAAT ACCTGCCACA TGAAATTCTA
ACGCCCACAC CCGAGTTTTC GGAAACTCAG GAAGTTTTGT CTGACAAAGC CAAACTCAAC
GCGCCGCAAT TTTTAGAGGC CATTCAGGAA CAACTGTCAC CGACACAGAA AACGATTTTA
AAAACCAATA ACATTGAAGA GATACAACGC TTTGCTCAAA CGTGTGAAGC CCTTGCCGAT
CAATACGATT CCAAGACGTT AAAAACCTAT GCCACCCAAT TGCTTGAAGC AACGGAAAGC
TTTGACATTA AAGCCATGCA GCAACTTTTA AAATACTACG AGACACTGGA AGCCAGGCTA
GACAAACTTT TAAACGATGC CATTTCGCCG TAA
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| Protein sequence | MLKHSLSALL LLSALLPFSA QALTLNSSEQ QWIKDHPQIT LGSDYNWPPY DFKDSAGKHN
GISADILDRI RQITGLKIKV RSGVWSTILE QAEQGTLDGL ACAVKTPDRA EHLYFTAPYT
SMPLGIFMQD KSTSTSIKTM DDLTTQTVTI NRDSYMHEWL KQNYPHLKLY LVNSNAEALE
AVSFGKANVY IGNMAVATYL IKKNYLTNIQ AVAKINHFKT DTAIAIHKDK PILFGIIKKA
LKEISQKERN TILEKWFIKS KTTYIDLSNQ EIAWIKAHPV IKVAGEPDWA PFDFVADNTY
QGIANDYLNL IAQKTGLNFH IDIHSWEQNL TLLKKQQVDV LPAAYFSAER TSYAKFTTPY
YKPLTYFFVR HDLKASSLND LENTTIAMPK GYLHIDFLKQ RFPNITILET DTLNEAINAV
IQNKAQVLYE NYAVLSYILS QSGINTIKPL APAKQANQSL HFMIRDSAPE LASIMNKALA
SITPQERKDI EERWLTIAPN KINITLTPAE QNWLNQHAQV SFTGYPDHLP YEGFKSNANQ
PIQHQGIVSD FIHSLESHLP LQFIPRAYKS WPDTLKAIHQ TPVDIISAEI DTPELLAQYR
PIIPYLTTPM VIVMKNQDTF VNTLRQLTTE TIALVSNDAT SEKLLKQYPN QHFKTWPNAK
SVLEAVAFNK ADAAILSLAK ASYLIKQNHY TSLKIVGKTD VQKQFTLFVN KRYPELFSIL
QKSMPAITEE HGSGILSQWT KIKFASKFDY ALFFQMFSFL LVVIGIIFFW NRRLTKEVKQ
RLQAEKRLKE NETQLQGLID SIPLMIMVTN HQGKILSANR QTLKNYQLNF QELSELNSTT
FYSDPDDRQQ ILNALQAGEQ IHQKIISMKD ADGIPRKMML SVLPIHFNQQ PANLSIAIDL
TERIQFEKEL QQAKEQAESA SQTKSQFLAN MSHEIRTPMN AIIGFTELLN EQVTEPRLKR
YIRTIQAAGK TLLTLINDIL DLSKIEAGKM DLDKKAVNPH SLFDEIGQIF MINIQRKGLD
FLVDIDKTLP EGLLLDGVRL RQILFNLLGN AVKFTEQGYV KLKVSACDVD EHHSKLDILI
QVSDTGIGIP EDQQARIFNA FEQRENQDVQ KFGGTGLGLA ITQRLVNMMG GDIWVESTPG
QGTTFNLLIH HVDISATNQS DQPNSDERPV PQLIEFHPTT ILVVDDIDDN RALIKQNFVD
TDVTVYEAQN GEEAINCFHS EKGISLILMD LRMPIMNGYQ AAEIIKQKSP STPIVALTAS
VMTETADAPK RQHFDDYLRK PVFKADLFNI LKKYLPHEIL TPTPEFSETQ EVLSDKAKLN
APQFLEAIQE QLSPTQKTIL KTNNIEEIQR FAQTCEALAD QYDSKTLKTY ATQLLEATES
FDIKAMQQLL KYYETLEARL DKLLNDAISP
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