| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2951 |
|---|
| Symbol | |
|---|
| ID | 6779805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3418651 |
|---|
| End bp | 3420405 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642768946 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002139750 |
|---|
| Protein GI | 197119323 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGGG GCTTTCGCTG GAAACTGATG GCCTCGTACC TGCTGCTCGT GCTCCTCTTG
GGGGCGGGAC TCTATTTCTA CCTCGCCGCA AGCCAGGAAA CCTCCATGAC CCAGGGGACG
CGGCAGCATC TCGAGGACGA GGCCCGCATC GCTTCGCTCA TGGCGCAAAA GGAGATCCGG
GACCTGAAAC AGGATGCGCC GGCTTTGACC GCGGCGCTGT CGAAGGCGAT ACGCTCGCGC
GTCACCGTCA TAGCGGGGGA CGGTGTTGTG GTCGCTGACT CCGGCCTGGC CCCGGACGAG
TGGGGCAAGC TGGAAAACCA CGCCAACCGC CCCGAGGTGC GGCAGGCGCT CAAGGAGGGA
ATCGGCAGCG CCATCCGCTA CTCGGCTACC CTCCACACCG ACATGCTTTA CGTCGCCGCT
CCTTTCGGGG ACCATGGCGT GGTACGGCTC GCGCTTCCGC TCTCGGAGCT GGAGCAGGCC
AAAGAGCGCC TGAGAAGAAG CCTGGGCGCC GCCCTCGCCG TCGCGGTCCT CGCTTCGCTT
CTTTTGTCCT ACTTCCTCTC CAATCTCAAC TCCAGAAACC TCAGAAGGCT CGCGACCGGC
GCCCAACGCA TCGGGCGGGG CGAGTTCGGC GCCAGGATTG CCGTCCAGAG CCAGGACGAG
ATGGGCGAAC TGGCCCACGT GATGAACGAG ATGTCGGGGC GGATCGAGCG GCAGCTGGAG
CTGATCTCCT CGGAAAAAAA CCAGCTGGAT GCGATCTTGA ACGGCATGGG GGAGGGGGTG
ATGGTCACCG ACCGGGACGC CGTGGTGACC CTGGTGAACC CCGCTTTTTG CACCATGTTC
GCCACCGGCG CCGAGCTGCA GGGGCGGCCG CTTCTGCAGA TCACCCGCCA CCCGGACCTT
TACGCCGCCT GCAGGGAGGT GCTCTCAGCG CGGCAGGAGC AGCACCAGGA AATAGCCCTT
GCCGGAGGGA AGACCGTGCT GGTGCACTGG GTCCCCCTGC GCGACGGGGA CGGGCTGCAG
GGGGCGGTGG CGGTGTTCCA CGACATCAGC GCCTTCAAGA GGGTGGAAAA GATCCGCCGC
GACTTCGTGG CAAACGTCTC TCACGAATTG AGAACGCCGG TCACGGTGAT CAAGGGGTAC
GCCGAGACGC TTCTCTCGGG AGCGCTCGCG GCCGACCCTG AGCGCGCCGA GCGTTTCCTG
CTGATCATCC AGAACCACGC CGACCGCCTT TCCGGCCTGG TCCGCGACCT CTTGACCCTC
TCCGAACTGG AGTCGGGGGA GATGGGGATG CAGTTGAAGC CGGTGGCGCT CGACGAGGCG
ATCCGGCAGG CGCTCCTCCT GGTGGGGCAG CGGGGCGAGG AAAAGGGGGT TCAACTGGAG
CAGCCGGCGG GGGAGGCGGG GTTGACCGTC CAGGCGGACC GCGGCCGGCT GGAGCAGGTG
CTGATTAATC TTTTGGACAA CGCAATCAAG TACAGCGAAA CGGGGAAATC CGTGGGAGTG
GAGACGGCGC GGGAAGGGGA CCTGGTGCGG GTTTCGGTGC GGGACTCAGG GATCGGGATA
CCGGAAAAGG ACCTGCCGCG CCTCTTCGAG CGTTTCTACC GGGTGGACGA GGCGCGCAGC
CGCGACAACG GAGGGACCGG TCTCGGGCTC TCCATAGTGA AGCACATCGT GCAGGCGCAC
GGCGGCACGC TGGAAGTGAA AAGCGAGCAG GGTAAAGGGT CCGTCTTCAG CTTCACGCTG
CCGATAGCCA GATAA
|
|---|
| Protein sequence | MKGGFRWKLM ASYLLLVLLL GAGLYFYLAA SQETSMTQGT RQHLEDEARI ASLMAQKEIR
DLKQDAPALT AALSKAIRSR VTVIAGDGVV VADSGLAPDE WGKLENHANR PEVRQALKEG
IGSAIRYSAT LHTDMLYVAA PFGDHGVVRL ALPLSELEQA KERLRRSLGA ALAVAVLASL
LLSYFLSNLN SRNLRRLATG AQRIGRGEFG ARIAVQSQDE MGELAHVMNE MSGRIERQLE
LISSEKNQLD AILNGMGEGV MVTDRDAVVT LVNPAFCTMF ATGAELQGRP LLQITRHPDL
YAACREVLSA RQEQHQEIAL AGGKTVLVHW VPLRDGDGLQ GAVAVFHDIS AFKRVEKIRR
DFVANVSHEL RTPVTVIKGY AETLLSGALA ADPERAERFL LIIQNHADRL SGLVRDLLTL
SELESGEMGM QLKPVALDEA IRQALLLVGQ RGEEKGVQLE QPAGEAGLTV QADRGRLEQV
LINLLDNAIK YSETGKSVGV ETAREGDLVR VSVRDSGIGI PEKDLPRLFE RFYRVDEARS
RDNGGTGLGL SIVKHIVQAH GGTLEVKSEQ GKGSVFSFTL PIAR
|
|---|
| |