More than 300 homologs were found in PanDaTox collection
for query gene Sden_2546 on replicon NC_007954
Organism: Shewanella denitrificans OS217



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  76.52 
 
 
513 aa  818    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  76.32 
 
 
513 aa  815    Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  76.52 
 
 
513 aa  817    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  76.52 
 
 
513 aa  817    Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  100 
 
 
515 aa  1065    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  76.94 
 
 
520 aa  826    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01215  Response regulator  58.32 
 
 
509 aa  598  1e-170  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  46.84 
 
 
525 aa  474  1e-132  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal 
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  43.27 
 
 
522 aa  437  1e-121  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  43.33 
 
 
518 aa  432  1e-120  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  43.98 
 
 
523 aa  431  1e-119  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  45.03 
 
 
524 aa  430  1e-119  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_004347  SO_2366  response regulator  44.78 
 
 
525 aa  422  1e-117  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  44.29 
 
 
523 aa  420  1e-116  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  44.29 
 
 
523 aa  420  1e-116  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  45.93 
 
 
523 aa  419  1e-116  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  44.49 
 
 
523 aa  420  1e-116  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  45.93 
 
 
523 aa  419  1e-116  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  42.5 
 
 
522 aa  419  1e-116  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  43.7 
 
 
527 aa  412  1e-114  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  43.49 
 
 
525 aa  412  1e-114  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  43.49 
 
 
525 aa  412  1e-114  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  43.02 
 
 
525 aa  412  1e-114  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  43.2 
 
 
521 aa  411  1e-113  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  40.66 
 
 
526 aa  402  9.999999999999999e-111  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  42.51 
 
 
523 aa  398  1e-109  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  41.89 
 
 
531 aa  389  1e-107  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  41.51 
 
 
536 aa  371  1e-101  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02571  response regulator  39.17 
 
 
521 aa  361  2e-98  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  37.35 
 
 
508 aa  347  2e-94  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  37.31 
 
 
529 aa  337  3.9999999999999995e-91  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1988  response regulator receiver modulated metal dependent phosphohydrolase  44.83 
 
 
437 aa  332  7.000000000000001e-90  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  37.35 
 
 
531 aa  330  4e-89  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  35.99 
 
 
471 aa  313  3.9999999999999997e-84  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  37.47 
 
 
517 aa  313  4.999999999999999e-84  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  34.19 
 
 
512 aa  288  1e-76  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  36.33 
 
 
432 aa  278  1e-73  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1101  response regulator receiver modulated metal dependent phosphohydrolase  31.79 
 
 
450 aa  238  2e-61  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  35.49 
 
 
578 aa  215  9.999999999999999e-55  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  36.14 
 
 
580 aa  212  1e-53  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  35.37 
 
 
580 aa  209  1e-52  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  33.85 
 
 
581 aa  206  6e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  34.77 
 
 
582 aa  206  9e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  34.7 
 
 
550 aa  200  3.9999999999999996e-50  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  34.74 
 
 
579 aa  199  9e-50  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  36.99 
 
 
767 aa  199  1.0000000000000001e-49  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.788805 
 
 
-
 
NC_010172  Mext_2117  histidine kinase  32.45 
 
 
631 aa  198  2.0000000000000003e-49  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0208634 
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  32.45 
 
 
593 aa  197  3e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0591  putative membrane associated signaling protein  49.51 
 
 
596 aa  197  5.000000000000001e-49  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0306  metal dependent phosphohydrolase  47.5 
 
 
361 aa  196  1e-48  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  42.36 
 
 
331 aa  192  1e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  47.09 
 
 
331 aa  192  1e-47  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  45.45 
 
 
338 aa  189  7e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  43.26 
 
 
363 aa  189  9e-47  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  44.95 
 
 
338 aa  188  2e-46  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  44.95 
 
 
338 aa  188  2e-46  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  44.44 
 
 
338 aa  186  6e-46  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  42.72 
 
 
338 aa  186  6e-46  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  39.86 
 
 
348 aa  186  8e-46  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  44.23 
 
 
331 aa  186  9e-46  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  44.23 
 
 
331 aa  186  9e-46  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  44.71 
 
 
331 aa  186  1.0000000000000001e-45  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  47.83 
 
 
328 aa  186  1.0000000000000001e-45  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  40.34 
 
 
340 aa  185  2.0000000000000003e-45  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  48.04 
 
 
338 aa  184  3e-45  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  48.04 
 
 
338 aa  184  3e-45  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  48.04 
 
 
338 aa  184  3e-45  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  35.96 
 
 
741 aa  184  5.0000000000000004e-45  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.77 
 
 
746 aa  183  5.0000000000000004e-45  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  48.04 
 
 
338 aa  184  5.0000000000000004e-45  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  42.34 
 
 
331 aa  183  6e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  41.87 
 
 
354 aa  183  7e-45  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  34.92 
 
 
740 aa  182  1e-44  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  29.44 
 
 
613 aa  182  1e-44  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  33.01 
 
 
337 aa  182  2e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  43.06 
 
 
328 aa  181  2e-44  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  39.84 
 
 
339 aa  181  2.9999999999999997e-44  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  39.92 
 
 
339 aa  181  2.9999999999999997e-44  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  44.98 
 
 
353 aa  181  4e-44  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  43.72 
 
 
350 aa  180  4e-44  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_013173  Dbac_2138  metal dependent phosphohydrolase  47.26 
 
 
606 aa  180  5.999999999999999e-44  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.258694  n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  42.59 
 
 
343 aa  179  7e-44  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_004347  SO_0860  response regulator  42.93 
 
 
339 aa  179  8e-44  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  35.46 
 
 
348 aa  179  1e-43  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  36.9 
 
 
360 aa  178  2e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  46.94 
 
 
350 aa  178  2e-43  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  44.55 
 
 
268 aa  177  3e-43  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_010505  Mrad2831_2085  response regulator receiver modulated metal dependent phosphohydrolase  45.81 
 
 
345 aa  177  3e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.931733  normal  0.012958 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  42.38 
 
 
337 aa  177  4e-43  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  35.14 
 
 
348 aa  177  4e-43  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  43.78 
 
 
367 aa  177  5e-43  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  41.71 
 
 
347 aa  176  7e-43  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_009486  Tpet_0738  response regulator receiver modulated metal dependent phosphohydrolase  45.13 
 
 
368 aa  175  1.9999999999999998e-42  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  37.32 
 
 
340 aa  175  1.9999999999999998e-42  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3169  response regulator receiver modulated metal dependent phosphohydrolase  43.06 
 
 
353 aa  175  1.9999999999999998e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.821118  normal 
 
 
-
 
NC_011989  Avi_4319  Metal dependent phosphohydrolase with a response regulator receiver protein  44.44 
 
 
382 aa  174  2.9999999999999996e-42  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0762  response regulator receiver modulated metal dependent phosphohydrolase  45.13 
 
 
368 aa  174  2.9999999999999996e-42  Thermotoga sp. RQ2  Bacteria  normal  0.218112  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  42.16 
 
 
399 aa  173  6.999999999999999e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  41.92 
 
 
352 aa  173  9e-42  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1253  response regulator receiver sensor signal transduction histidine kinase  33.43 
 
 
584 aa  172  1e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>