Gene Dtox_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1078 
Symbol 
ID8428017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1104454 
End bp1105830 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content45% 
IMG OID645033413 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003190587 
Protein GI258514365 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTAA AAGGTGTAAT CTGGCGGGCA GCGGCCAGCT ATTTTATATT GCTGGCTGTT 
TTTTGGGGTC TCCTGGAACT GTATAAGGCA CAGTTATTAA CTTTTGCCGG GGCTTTTCTG
ACCGCATCTT TATTATCCGT GGTTTTTGCC TGGCTCTTAT ATAAGAGGGT AATTAATCCT
CTTGCTGTGA TGAGTGAAGT TACCCAGGAA ATGGCCCGAG GTAATTTTGA CCAGCAAATT
ATTATCAGGT ATCAGGATGA GATAGGTGAA TTGGCGGCTA ATATAAATAA CCTGGCCGGT
CAGCTAAAAA CCGTTATTAC GGATATTACT ACAGAAAAAA ACAGAGCGCG GGCTATACTG
GACAGTATGG CCGACGGGGT AATCGCACTG GACCGTGAGG GCAAGGTGCT GCTGGTTAAC
CCTGCCGTGG AGGATATATT TGCCATAGAA AATCCGGCTG ATCAGGTTAA AAATATTCTG
GGTATAATTA GAAACTACGA ATTGGAACAA CTGCTATTTC ACGCCTTAAA AAGGAATGAG
CCGATGGTGA AGGTGCTGAA GATTTTAACA TCAGAAGAAC CCAGGGTCTT TCGTGTGCAC
CTGACACCAC TCAGGTCTTC GGACACTAAA ACAGAAGGTA TAGTTGCTGT CTTGCGAGAT
ATAACGGACA GGCGAAAACT AGAGCAAATG CGTACAGAGT TTGTAGCCAA TGTTTCACAT
GAATTGCGTA CTCCACTGAC ATCTATCAGC GGCTTTTTGG AAACGCTTTT AGACGGTGCA
CTGGAGGAGC CGGAAATAGC CAGAAGATTT TTGGAGCATA TGAGTGATGA GACAGAGCGT
TTGACCAGAT TGATCAATGA TCTGCTGAAT CTCTCTAATA TTGAAGACCG GCAATTTGTG
CCGAATTTTC AGCCGGTAGA TATGGCCGAG CTTATACATA GAGTGGCGCC TGTTTATGAA
CCGAGAGCCA GGGAAAAAGG TTTGACCTTA ATGGTTACTC TTTCTCCCAA CCTGCCTCCG
GTAATCGGGG ATGAGGACTT GCTGATGCAG GTTTTGACCA ATTTGATTGA CAATGCAATA
AAATACACAC CGGCTAAAGG TAAAATAGAA ATAAAAGCCA GGGCCAGTGA GCAGGAAATG
AAGGTTATTG TGACCGATAC CGGTATAGGT ATTCCCACAG AAAGCCTGGC TCGAATTTTT
GAACGATTTT ATCGTGTTGA TAAAGCCCGT TCACGTGAAA TGGGAGGGAC GGGGCTTGGA
CTTTCCATTG TGAAGCATAT TGTTGAGAGG CACGGCGGTT CTCTGGAGGT AACCAGTACA
GTTGGCAAAG GCAGTATATT TGCTTTTATT TTGCCGGTTG CCGGAGATTT ACACTGA
 
Protein sequence
MLLKGVIWRA AASYFILLAV FWGLLELYKA QLLTFAGAFL TASLLSVVFA WLLYKRVINP 
LAVMSEVTQE MARGNFDQQI IIRYQDEIGE LAANINNLAG QLKTVITDIT TEKNRARAIL
DSMADGVIAL DREGKVLLVN PAVEDIFAIE NPADQVKNIL GIIRNYELEQ LLFHALKRNE
PMVKVLKILT SEEPRVFRVH LTPLRSSDTK TEGIVAVLRD ITDRRKLEQM RTEFVANVSH
ELRTPLTSIS GFLETLLDGA LEEPEIARRF LEHMSDETER LTRLINDLLN LSNIEDRQFV
PNFQPVDMAE LIHRVAPVYE PRAREKGLTL MVTLSPNLPP VIGDEDLLMQ VLTNLIDNAI
KYTPAKGKIE IKARASEQEM KVIVTDTGIG IPTESLARIF ERFYRVDKAR SREMGGTGLG
LSIVKHIVER HGGSLEVTST VGKGSIFAFI LPVAGDLH