| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0234 |
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| Symbol | |
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| ID | 5132250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 238395 |
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| End bp | 240140 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529136 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001213701 |
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| Protein GI | 147668883 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGAA GCCTTAAATG GCGTTTGATA ACTCTGTTCT GCCTGCTTAT TGCCGGTTGT
GTGGGTATAC TGAGTATTTT TCTTTCCAAT CATCTGGAAA ATTCGTATAT GGATAACCTG
CAGTCACGCC TGATACAGGA GGTTACCCTG TTTTCACGGG TAGTGCCTGA ATATATCACC
GAAAGCCCGG ATAGTTTTGA TGCCGGTGTA AAGAAACTTG GGGCTTCGCT GGATATAAGG
CTGACCGTGA TTGCCCTTGA CGGACAGGTG CTGGCAGATT CACTCCAGTT GCCTTCGGAA
ATGGAAAACC ACTCTACCAG AATTGAGTTT ATTGATGCCC TTGCAAGCGG CATCGGCATA
AGTATTCACC CATCTGCCAG CCTGGGGTAT GAAATGCTGT ACGTGGCTAC TCTGGTTAAA
AGCGGCCAAG ATGTGCTGGC GGTAGCGCGG GTGGCTTTGC CGGTGGAAGA GGTGTACGCT
GCCGTACGGG AGGTAGACCG TACTATTCTG CTGGGTGCGG TAATAAGTAT ACTGGCGGCC
GGTCTGCTGG CGGTTTGGGT AGCGGCCAGT GTTACCCGTC CGGTTAAGGA ACTGACGGCT
ATTTCCAGGC GTATTGCCCA AGGGCAAATG GATACCATTC AGATAGATGT AAGCGGCAAA
GGGGAAATGG AAGAGCTGGC AAAGGCCTTT CGGCTGATGA CTGAGCGCCT GCGTGACAGC
ATAAAAGCTG TCAGTTCGGA GCGTGACCAT CTTTCGGCGG TACTGGAACG CATGGGGGAC
GGCATTTTCC TGCTGGACCG TGAGGGTTCA ATAAACCTTT TAAATCACGC TTCTGAGCGA
ATATTCAAAC TGGAAGCTGG CGGAGTAATA GGGCATAGCT TTGTGGAAGC GATACGTGAC
CATGAAATAA ACGCTGTTTT TGAGCGTGCT AAATCCTCCG GCAAACAGGA GATGGGTTTT
GTAGAGCTTA CCGCAGGCAA GCGTTTTCTG GGCATTATTG CCACCCCTCT GGTCAGCCAG
TCCGGTTATC TGGTGCTGGT GCAGGACCTT TCGGAGCTTC GGCGGCTGGA AAAGGTTAGG
CGGGATTTTG TAGCCAATAT TTCCCACGAA TTACGTACAC CCATTACCTC TCTTAAACTG
TTAACAGAAA CCTTGCAGGA AGGAGCGGCA TCTGACCCTG ATGTGGCGGC CGGTTTTATT
GATAAAATCC ACCTTGAGGT AGATAAACTG GCCCAGCTGG TTACGGAATT AAGTGATCTC
TCTGCTATAG AAAGCGGGCA GGCGGTTTTG AACCTCCAGC CGGGAGATAT AAGAACGGCT
ATCAAACTGG CGGCTGAAAG GCTTAGTCCT CAGGCAGAAC GGGCGGGTAT AATTCTTGGG
GTAGAGCTGC CTGAAACCCT GCCGCAGGTA AGACTGGACG AAAACAGGGT TGAGCAGGTA
CTGGTTAATC TGGTGCATAA CGCTATCAAG TTTACTCCCA AAGGCGGAAA GATAAAGATT
GGTGTCCGTA CTCAGAGCCA AACACTGGTA GTATATGTAA CTGACAGCGG CATAGGTATA
CCCGAAGATG ATTTAACCCG GGTGTTTGAG CGTTTTTACA AGGTGGACAA ATCCCGTTCC
GGTGGGGGCA CAGGTTTGGG GTTGGCTATT TCCAAGCATA TTGTGCAGGC TCATGGCGGG
AGTATTTGGG CAGAGAGCGT TTATGGCAAG GGAGCTACCT TTAGCTTTAG TTTGCCGCTA
GCCTGA
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| Protein sequence | MTRSLKWRLI TLFCLLIAGC VGILSIFLSN HLENSYMDNL QSRLIQEVTL FSRVVPEYIT
ESPDSFDAGV KKLGASLDIR LTVIALDGQV LADSLQLPSE MENHSTRIEF IDALASGIGI
SIHPSASLGY EMLYVATLVK SGQDVLAVAR VALPVEEVYA AVREVDRTIL LGAVISILAA
GLLAVWVAAS VTRPVKELTA ISRRIAQGQM DTIQIDVSGK GEMEELAKAF RLMTERLRDS
IKAVSSERDH LSAVLERMGD GIFLLDREGS INLLNHASER IFKLEAGGVI GHSFVEAIRD
HEINAVFERA KSSGKQEMGF VELTAGKRFL GIIATPLVSQ SGYLVLVQDL SELRRLEKVR
RDFVANISHE LRTPITSLKL LTETLQEGAA SDPDVAAGFI DKIHLEVDKL AQLVTELSDL
SAIESGQAVL NLQPGDIRTA IKLAAERLSP QAERAGIILG VELPETLPQV RLDENRVEQV
LVNLVHNAIK FTPKGGKIKI GVRTQSQTLV VYVTDSGIGI PEDDLTRVFE RFYKVDKSRS
GGGTGLGLAI SKHIVQAHGG SIWAESVYGK GATFSFSLPL A
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