| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3831 |
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| Symbol | |
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| ID | 5749414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4219251 |
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| End bp | 4222784 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298929 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_001564847 |
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| Protein GI | 160899265 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.195944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0220401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGAT CTTCCAGCCA CCAGACCACC CAGCGCTTTG CCGTTCCATG GACGCTTGTT
GCAGGCTTTG GTGCAGCGGC CCTGGCCACC CTGGTCATCG CCTTCGTCAA TTTCCGGTCG
TCCGAGGCGC GAGGCCAGGC CGTGAATGCC ATGGACCGCA CGACGCTGGC CATGCGCCAG
CTCAGCCAGC TCAACGCCTC GCTCAAGGAT GCCGAAACCG GACAGCGGGG CTTTCTGCTG
ACGGGTGACC AGGCCTATCT GCAGCCCTAC CAGCAGGCGC GCGATGTGCT GCAAAAGCAG
CTGGAGGCGC TCAAGGCGCG CACGTCCAGC GACTCCGTCC AGCACCGGCT GCTGGACCAG
ATCGAGGACA TCTCGACCCA GAAGCTGCGC GAGCTGCAGG AAACCATAGA CTTGCGCAAG
GCCGGCGACC TGGACGCCGC CATGGCCCTG GTGCGCCTGG ACGTGGGCAA GAACGCCATG
GACCGGCTGC GCGAGCTGAT CGATGATCTC TACACCCGCC AGACCCGTGA GCTGGAGCAG
CGCCGCCAGC TGTGGGTGGA GGCATCCACC ACCTCGACGT ACTACTCCTG GGGCGGCTCC
CTTATCTTGC TGGGCCTGAT CCTGGCATCG GCTGCGCTGA CGGTGCGCGA GTACCGCGTC
AAGGCGCGCC AGTCTTGGGT AACTTCCGGT CTGTCCGGCC TGGGCCAGCA GTTGCAGGGC
GACCGCCGGC TGGAAGACCT GGGCCAGAAG GCACTGGAAT ACCTGGCCAC CTACCTGCGC
GCCGAGGTGG GCGCCGGCTA TGTGGTGGAC TGCGCCGACG GCGGTCTGCG CCTGTTCGGC
GGCTATGCCT TGCCGCGCGA GCGCCTGCAG CACAAGCTGC TGCCCGGCGA GGGCCTGGCG
GGCCAGGCGG TCGCCTCGCG CAAGCTGCTG CATGTCAGGG ACGTGCCCGC GCAGCACCTG
CCGATTTCCT CGGGCACCGG CCAGTCCAGC CCGTTGCAGC TGATGGTGGC GCCCGCCATG
GAGAACGGCG AAGTGTTCGC CGTCATCGAA CTGGGCTTTC TGCGCGGGGT GAGCGAGGCA
GAGCGCAGCC TGCTGGAGCG GGCGTCCGAA ATGCTGGCCG TGGCCATCCG CTCGGGCCTG
GACCGTTCGC GCCTTGAGAC CTTGCTGGAA GAAACGCGCC GCCAGTCGGA AGAGCTGCAG
GCCCAGCAGG AAGAGCTGCG CGTGAGCAAC GAGGAGCTGG AGCAGCAAAG CCGCATCCTG
CAGGAGTCGC AGACGCAGAT GGAGCACCAG CAAAGCGAGC TGGAGCAGAC CAATGCCCAT
CTGGAGGAGC AGACCCAGCA GCTGGAGTAC CAGCGCGAGC AACTGCTGCG CGCCCAGGGT
GCGCTGACCG ACAAGGCGCA CGAGCTGGAA CTGGCCAGCC AGTACAAGAG CGAGTTCCTG
GCCAACATGA GCCACGAGCT GCGCACGCCG CTGAATTCCA CGCTGATCCT CGCCAAGCTG
CTGGCCGACA ACAAGCCCGG CAACCTGCAG GCCGATCAGG TCAAGTACGC GCAGACCATT
CATGCGGCGG GCAGCGACCT GCTGGCGCTG ATCAACGACA TCCTGGACCT GTCCAAGATC
GAGGCCGGCC AGGTCAGCGT CCTGGTGGAG CCCATGACCA TCGCCACCGC CTTGCAGGCG
CTGATGGAGC CGCTGCGCCC CATCGCCCGC GAGAAAGGCC TGGAGCTGAC ATGGACGGTG
GACCCCGGCG TGCCGGCCTC CATGCAGACC GACCCCATGC GGCTGGCCCA GGTGCTCAAG
AACCTGCTGT CCAACGCGCT CAAGTTCACG GCCAAGGGCT CGGTCGGCCT GCAGGTGTCC
CGCGTGCCCG GGGGTATGCT GGCGTTCGCC GTGCGCGATA CCGGCATCGG CATTGCCGAG
CAGCAGCAGC AATTCATCTT CGATGCCTTC CGCCAGGCGG ACGGCAGCAC GCATCGCAAG
TTCGGCGGAA CGGGCCTGGG CCTGTCGATC TCACGTGATC TTGCCGGGCT GCTGGGCGGC
ACGCTGACCG TCTCCAGCAC GCCGGGGCAG GGCAGCGTGT TCACGCTGAC CGTGCCTGTG
ATCCTGGAGC TGGTGGAGCC TGGCCAGGCC TTGGCTGCCG CGCCGCTGCC CCGCCCGGCG
CGGGAATCGC TGGCGAATGA GCAGACGCAG ACGCAGGTGT CATCGCCCGC TTCCGTGCCC
GCCGTCGCCT CGGCCCATGT CGCGCCGGCT GCGCCCGCGT TCGCGCCGGC CATGTCGCCA
GCCATGTCTG CGCCGATGCT GTCGCCTACC TCGTCCGCCG CGGATGCCCT GCGAAAGAGC
GGGCAGAGCG GGCGCCGCAT CCTCGTCATC GAGGACGATC GGCGCTTTGC CGACATTCTT
TCCGAGCTCG CGCGCGAGAT GGATTTCGAA TGCGATGTGG CCAGCACCGC GTCCGACGGC
CTGGCCATGG CGGCAAGCAA CCAGCCCAAC GCCATCGTGC TGGACATCAA CCTGCCCGAT
TTCTCGGGCC TGGGCGTGCT GGACCAGCTC AAGCGCAACC CCGTCACGCG CCACATTCCC
GTGCACGTGG TCTCGGTGGC CGACTATTCG CAGGAGGCCA TGGGGCGCGG CGCCGTGGGC
TACGCACTCA AGCCCGTCAA GCGCGAGGAA CTGGTCCATG CCCTGAAGCG GCTGGAGGCC
AAGTTCACCC AGGACCTGCG CCGCGTGCTG GTGGTGGAGG ACGACGAGCG CCAGCGCGAG
AGCGTGCGCC ACCTGCTCAG CCGCAGCGAC GTGGACATCG TCTGCGCGGG CACGGCGGCG
GCGGCGCTGG AACATCTGCG CGGCGCCACC TTCGACTGCA TGGTGATGGA CCTGAACCTG
CCCGACATCA GCGGCTACGA GCTGCTGCAG CGCATGACGG ACCAGGACGA TGTTTCCTTC
CCGCCTGTCA TCGTCTACAC GGGCCGCGCG CTCTCGCGCG ATGAAGAGCA GCAGCTGCGG
CGCTTTTCCA AGTCCATCAT CATCAAGGAC GCGCGCTCGC CCGAGCGCCT GCTCGACGAG
GTCACGCTGT TCCTGCACCA GGTGGAGTCC GAGCTGTCGG CCGAGCACCG CCAGATGCTG
CAGGTGGCGC GCAGCCGCGA GTCGGCGCTG GAAGGGCGCA CGGTGCTGGT GGTGGAGGAC
GATGTGCGCA ATGTGTTCGC GCTGTCCAGC ATCCTGGAGC CCACGGGCAT CCGCGTGGAG
ATCGCGCGCA ACGGGCGCGA GGCGCTGGAA ACCCTGGAAG CGCGGGGCAC GGCGCAGGCC
GGCATCGACC TGGTCCTGAT GGACATCATG ATGCCCGAGA TGGACGGCTA CACCGCCATG
CGCGAGATCC GCAACCGCCC GCAATGGCGC CGCCTGCCCA TCATCGCCCT GACCGCCAAG
GCCATGAAGG ACGACCAGGA GAAATGCCTG GCCGCCGGTG CCAACGACTA CATCGCCAAG
CCGCTGGACG TGGAGAAGCT GCTGTCGCTG GTGCGGGTGT GGATGCCCAA GTAG
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| Protein sequence | MPRSSSHQTT QRFAVPWTLV AGFGAAALAT LVIAFVNFRS SEARGQAVNA MDRTTLAMRQ
LSQLNASLKD AETGQRGFLL TGDQAYLQPY QQARDVLQKQ LEALKARTSS DSVQHRLLDQ
IEDISTQKLR ELQETIDLRK AGDLDAAMAL VRLDVGKNAM DRLRELIDDL YTRQTRELEQ
RRQLWVEAST TSTYYSWGGS LILLGLILAS AALTVREYRV KARQSWVTSG LSGLGQQLQG
DRRLEDLGQK ALEYLATYLR AEVGAGYVVD CADGGLRLFG GYALPRERLQ HKLLPGEGLA
GQAVASRKLL HVRDVPAQHL PISSGTGQSS PLQLMVAPAM ENGEVFAVIE LGFLRGVSEA
ERSLLERASE MLAVAIRSGL DRSRLETLLE ETRRQSEELQ AQQEELRVSN EELEQQSRIL
QESQTQMEHQ QSELEQTNAH LEEQTQQLEY QREQLLRAQG ALTDKAHELE LASQYKSEFL
ANMSHELRTP LNSTLILAKL LADNKPGNLQ ADQVKYAQTI HAAGSDLLAL INDILDLSKI
EAGQVSVLVE PMTIATALQA LMEPLRPIAR EKGLELTWTV DPGVPASMQT DPMRLAQVLK
NLLSNALKFT AKGSVGLQVS RVPGGMLAFA VRDTGIGIAE QQQQFIFDAF RQADGSTHRK
FGGTGLGLSI SRDLAGLLGG TLTVSSTPGQ GSVFTLTVPV ILELVEPGQA LAAAPLPRPA
RESLANEQTQ TQVSSPASVP AVASAHVAPA APAFAPAMSP AMSAPMLSPT SSAADALRKS
GQSGRRILVI EDDRRFADIL SELAREMDFE CDVASTASDG LAMAASNQPN AIVLDINLPD
FSGLGVLDQL KRNPVTRHIP VHVVSVADYS QEAMGRGAVG YALKPVKREE LVHALKRLEA
KFTQDLRRVL VVEDDERQRE SVRHLLSRSD VDIVCAGTAA AALEHLRGAT FDCMVMDLNL
PDISGYELLQ RMTDQDDVSF PPVIVYTGRA LSRDEEQQLR RFSKSIIIKD ARSPERLLDE
VTLFLHQVES ELSAEHRQML QVARSRESAL EGRTVLVVED DVRNVFALSS ILEPTGIRVE
IARNGREALE TLEARGTAQA GIDLVLMDIM MPEMDGYTAM REIRNRPQWR RLPIIALTAK
AMKDDQEKCL AAGANDYIAK PLDVEKLLSL VRVWMPK
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