Gene Gbem_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0800 
Symbol 
ID6783633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp939681 
End bp942329 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content63% 
IMG OID642766769 
Producthistidine kinase 
Protein accessionYP_002137619 
Protein GI197117192 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.127646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGC TCAAGTTCCA TCTGCTGTTC TGCCTGACGA TGCTGGCAGC GCTACTCATC 
CCGACGACGC CGCGCTGCGA ACAGTCGCAG CACAAGAAGA TCCTGGTTAT CAACTCCTAT
CACGCAGGGT ACACGGGGTC CGACGGCATC GTCGCCGGCT TCAGCGAGAC CCTGAAAAGA
ACCTTCCCCG CCGCGGAAAT CACCATCGAG TACCTCGACT CCAAGAACTA CAGCGGCCCC
GAATACGACC GCCGCGTGCT GGATACCCTC CACTTCAAGT ACAAAAAGAA GCCGTTCGAC
CTCATCTTCA CCAGCGACGA CTATGCCTTC AACGTCGTGG AAAAACACCG TGACGAGCTC
TTCGGCAACC CCCCCGTGGT CTTTTGCGGG ACCAACGACT TCGACGCCGA GCGCATCAGG
AACCGCCTGG ACTTTGCCGG GATAGACGAG AGCCCGAGCT TCGGGGACAC GCTGGAACTG
ATCTTCAGGC TCCACCCCGA CAGCAAGCGG GTGGTGGTCA TCCACGACGA CTCCATCACC
GGAACCCTCA ACAGTGCGAG CTTCAAGGAA GCAGCAAGCC CCTTCCGGTC GCGCGCCGAA
TTCATTTACC GCGAAGGGAA GAGGCTCGAA GAGCTGATCC GCGAGGTGCA GCAGATCCCC
CCCGACAGCG TGATCGTCTA CTTCGCCTCC TTCGTACCGG ACGCCAAAGG GGCGCGCATC
TCCAGCGTGG AGGCGCTGCG GCGCATCTCC GACGCGAGCC GCGCCCCGGT TTACGGGGGG
TGGGAATTCA ACCTGGGTTA CGGGATCGTC GGGGGGCGGC TGGTCAACCT GCGCCGGCAC
GGAGTGGCTG CCGCGGACCT CGCTGTCGAC GTCTTAAAGG GGAAGCGCAT CCAGTCGCGC
CTGCAGCCAA GCCCCAACCA GTACATGTTC GACTACACCG AGATGCAGCG GTTCAACATC
CCGGTCTCGA AACTGCCGGC GGACAGCATC GTCATCAACC AGCCGCAGAC CTTCCTCTCG
CGCTACGGCT TCAGGATGAT GGTGCTCCTT TCGGCCAGCC TGTTCCTGCT GCTGCTCTTG
GCCCTCGCCA AGCTGGTGAT CAGCCGCAAC GAGGCGCGGG CCAGCGAGGC GCGCTACCGC
GGCATGATCG AGGCGTTCGA CGGCTTGATG TACATCTGCT CCCCAGATCG CCACTTGGAG
TTTATGAACG AGCGCCTGAT CGAAAGGACC GGACGCGACG GGACCGGCGG CATCTGCCAC
CAGGTGCTCC ACGACCTTCC CGCCCCCTGC CCGTGGTGCC ACGGCGTGGA AAGCTTCGAA
GGCAAGAGCG TGCAGTGGGA GTGGAACAGC CCCGAGGATG GCCGCTGGTA CCAGGTCTTC
AACACCACCG TGGAGAACGC CTACGGCACC AGTTCCAAGC TGGCCATGAT CACCGACGTG
ACCGAGCGCA AGGAAGCGGA GGAGGCCCTG CGCCAGGCGA TGGACGCGGC CGAGAGGGCC
AACCGCGCCA AGAGCGAGTT TCTCTCCAAC ATGAGCCACG AGATCCGCAC CCCCATGAAC
GGGGTGATCG GCATGACGCA GCTGCTGGAA CTGACAGAGT TGAACGCGGA GCAGCGCGAA
TACGTCAGCT CCCTGAAGAG CTGCGGCAAG AACCTGCTGA CCTTGATCAA CGACATACTC
GACATCTCCA AGATCGAGGC GGGGATGATG ACCCTGGAGT CCGAGCAGTT CAGCCTGCTG
CAAAGCATCA GGGACGTGGT GATGACCCAG AACCCGGCCG CCAGGGAAAA GGCTCTTCGG
CTCCAGGTCG AAGTGGCGCC GGATGTCCCC GATGCGGTAC TGGGCGACCA GCTCCGGTTC
AAGCAGATCC TACTCAACCT TTTGGGGAAC GCCGTCAAGT TCACCGAAAA AGGCGGGGTC
ACCATCACCG TCACGCTGCT GGAGCAGCCC GTGGCCCCTC CCCTGTTCCA AATGGCGGTG
CGTGACACCG GCGTCGGGAT AGCGGCCGAG GCGCTGGAGG AGATCTTCAA GCCCTTCGTC
CAGGTAGACG GCTCCACCAC AAGGAAGTAC GGCGGGACCG GGCTCGGGCT CAGCATCAGC
CGGCGCCTCG CCGAGATGAT GGGGGGAAGC ATCTCCATCG AGAGCACGCC GGGAGTCGGC
AGCTGCTTCA CCCTGACCCT TCCCCTGAGC CCCGCCCCCG ACGGGAGCAA ACCTGTCGAG
TCGCCGCGCC AGGAAGGCCC CGCTCTTTGG GGAGGGCGTT ACCTGCGGCT TTTGCTGGTG
GAGAACGACC AGACCAACAT CATGTTCGCC GCGTCCCTGT TCAAAAAGCT CGGCATGGAG
ACCACGGTGG CGGAGAACGG CAGGGAATGC CTGGCCCAGC TGGAGCAGGG GGATTACGAC
GTAGTGCTGA TGGACATACA GATGCCGGTG ATGAGCGGGG ACGAAGCGCT TAGGCAGATC
CGGGAGAAGG AGCAGGGGAC CTCGATCCAC CAGCCGGTGA TCGCCCTCAC CGCCTACTCG
CTAAACGACG ACAAGAGACG CTTCAGGGAG GAGGGGTTTG ACGGCTACCT CTCCAAGCCG
CTGGAGACCG GCGAGCTGAT CCAGGAATTG CAGCGGGTCC TGTACGCCGT GGAGGTGAGT
CATGACTAG
 
Protein sequence
MKPLKFHLLF CLTMLAALLI PTTPRCEQSQ HKKILVINSY HAGYTGSDGI VAGFSETLKR 
TFPAAEITIE YLDSKNYSGP EYDRRVLDTL HFKYKKKPFD LIFTSDDYAF NVVEKHRDEL
FGNPPVVFCG TNDFDAERIR NRLDFAGIDE SPSFGDTLEL IFRLHPDSKR VVVIHDDSIT
GTLNSASFKE AASPFRSRAE FIYREGKRLE ELIREVQQIP PDSVIVYFAS FVPDAKGARI
SSVEALRRIS DASRAPVYGG WEFNLGYGIV GGRLVNLRRH GVAAADLAVD VLKGKRIQSR
LQPSPNQYMF DYTEMQRFNI PVSKLPADSI VINQPQTFLS RYGFRMMVLL SASLFLLLLL
ALAKLVISRN EARASEARYR GMIEAFDGLM YICSPDRHLE FMNERLIERT GRDGTGGICH
QVLHDLPAPC PWCHGVESFE GKSVQWEWNS PEDGRWYQVF NTTVENAYGT SSKLAMITDV
TERKEAEEAL RQAMDAAERA NRAKSEFLSN MSHEIRTPMN GVIGMTQLLE LTELNAEQRE
YVSSLKSCGK NLLTLINDIL DISKIEAGMM TLESEQFSLL QSIRDVVMTQ NPAAREKALR
LQVEVAPDVP DAVLGDQLRF KQILLNLLGN AVKFTEKGGV TITVTLLEQP VAPPLFQMAV
RDTGVGIAAE ALEEIFKPFV QVDGSTTRKY GGTGLGLSIS RRLAEMMGGS ISIESTPGVG
SCFTLTLPLS PAPDGSKPVE SPRQEGPALW GGRYLRLLLV ENDQTNIMFA ASLFKKLGME
TTVAENGREC LAQLEQGDYD VVLMDIQMPV MSGDEALRQI REKEQGTSIH QPVIALTAYS
LNDDKRRFRE EGFDGYLSKP LETGELIQEL QRVLYAVEVS HD