| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1968 |
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| Symbol | |
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| ID | 5456975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2150054 |
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| End bp | 2152594 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877545 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001413240 |
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| Protein GI | 154252416 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGGC AAGCCTATCC CAGATTCGAC TATCGCATGC TTCGCTCCCT TGTGGGGCCG
ACGGCCCGCG ACGTCGCGCT GAAAATGTTC GCCCTCCTGA TCGCGCTCGT ATTGATCCAA
TCCCTTGTCG ACTATTACCA GCTGCGCAGC GTGATGTTCA CCAGTGTCGA GCAGCGGGCG
TCGATGGTAG CCGACCACCT CGCCATGCGT TCGCAGCTCG ATGGCGACTT CAACGTCGGC
GAAGCGAGCC AGGCGGTTTC CCGCGAGGCG CTCTGGCATG ATGATTTGCT GGGGGTCTAT
CTCATCGACG ACACCGGCAA TGTGCTGGAG GGCGCGGAGA CGGCGCGCAT CGCCAATACG
CCCGCCCTGT TTGCTCATCC GGAAATCCGG ACCGCGATCA ACGCAAGCTT CATCCTCGAG
CGCCCGCAAA GTTTCAAGGC AAGTTTTGAC GGCATCGATG GCTGGGTCTA TGTCGCGGCG
ATACCTGGAA CAAGGCTGGG CAGCTTGACC GTGGTCAGCC TGCAATCGAT GCAGAGCGAA
CTCGCCGCGG CCGCGCTCTC CTCGCTCGTG CGCAGAATGT TGACGACCGT TATTCTCATG
GGTGCGCTTT TCCTGGTGCT GCACGCCGCC GTGATCGGCC CGGTGCAGAG ACTGGCCACC
GCCGTTCGCA ATAGTGTCGG CGGATATTTC GATCCGCCCA GCGATATTCC CAAAGGCGAA
CTCAGCGACC TTGCCCTGCT TTTCGGCCAG GTTTTCGGCC GGTTGCAGCA TAGTCTTCGC
GACAACGAGC AGCTCGCGCT CGTCGCCAAC GGCACTGACG CCGGTGTGCT CATAGCCGAC
CGCACGGGGC AGATCGTCTG GGCTAATGCG GGCTATCTGC GGATGACCGG GCTTGAGCGC
GAGGACATCG AAGGACGCTT GCCACGCGAC ATTCTGGTTC GCCATGCAGG CATCGGCGCC
TTGAAGATTC TTGCGGAAAG CGCCGCCGAC GGCGAGGGCC GCAACGTCGA GATGATCGGC
CTGACGAAAC AGGGAACTCA ATACTGGGCT TCTATCGAAA TACGGCCGGT CCGCGATGCA
AAGGGTTCGA TCCGCAACTA CATCGTGGTC GAGAACGATG TGAGCCGGGC AAAGCAGACC
GAAATCAAAC TGAAACGAAG CCAGCTCGAG CTTCAGGACC GCGTTCTCGA CCTGCAACAC
ACATCGCTGC AACTTGAACA GGAGCGCGCG AAACTCACTC GCACAGCCCA AGATCTCTCG
ATTGCGAAAG AGGCGGCGGA AAACGCGAAC CGCGCCAAAT CGGCCTTCCT CGCCACGATG
AGCCACGAAC TGCGCACTCC GATGAACGGC GTCCTGGGCA TGGCCGACCT TCTTCTTTCC
GGCCCTCTGA CACAGGAACA GCGCGACGGC GTTACGACGA TCCGCGAGTC GGGCGAATGC
CTGCTGACGA TCCTCAACGA TATTCTCGAC CTCTCCAAGC TCGAAGCAGG CCGCCTCGAA
CTCGAACCGG AACCGACATC GCCAATGACC GTTCTCGAGA CGGTTGTCGA AGTGCTGCGC
CCGAATGCGA AGGAGAAGGG GCTAGTCCTG ACGAAGAGCG AAGAAGGCCA TATCCCGCAA
CGGATCATGA GCGATCCGAC GCGGCTTCGT CAGATTCTTT TCAATCTTGT CGGCAACGCG
ATCAAGTTCA CGCCACAGGG CGAGGTCAGC GTATCTCTCG CTGCCAGGGC CTGCGACGAC
CCGGACACAG CCGAACTCGT CTTCACGGTG CGCGACACAG GCATCGGCAT TCCGGAAGCC
ATGCTGCCGC GTCTTTTCAC GCGCTTCCAG CAGGCGGATT CTTCGATCTC GCGCACATAT
GGCGGCACCG GCCTCGGGCT CGCCATTACA CGAGAACTGA CCACGCTCAT GAACGGCACC
ATAGAAGTGG AGAGCACCGA AGGAAAAGGC AGCTGCTTCA CTGTGCGCCT GCCTGTCCGT
GTGTTGAGCG AAGGAAAGGC AGACACGCAA CCGGCCGCGG CCGGACAAAC CCCGCTGCCG
GGAACGAATG CGCCATTGAG AGTGCTGCTC GCCGAAGACC AGCCCGTGAA CCAGAAGCTC
ATGTGTGCGG TGATGGAGCG GCTTGGCCAT CAACTGACCA TTGCCGAGAA TGGCGTGGAA
GTTATCCGCA AGCTGCGCGA GCAAAGCTTC GACATCATTC TCATGGATAT CCAGATGCCG
CTGATGGACG GCATCCAGAC GACGAAGGTG ATCCGTGCCG TCGACGAACC CTGGAATGAC
ATACCGATCG TCGCACTGAC CGCCCATGCA ATGGAGGGGC ATTGCGAGCT TTATATGGCC
GCGGGCATGA ACGGCTTCGT ATCGAAGCCG TTCAAGATCG ACGTTCTGGT GGAAGAAATG
GCGCGCGCTC TGTCCGAAGC CTCCATGCCG CCCTCCCCAT CACGCGAAAC CGAGAAAGCC
GCCAGCGGGG AAGCCAAGGG TTCGCCCGCG GAGGACGCGC TTGAAAAAAT GCTGGAAGAA
CTCGAGCGGA TGGCCGGATA A
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| Protein sequence | MRGQAYPRFD YRMLRSLVGP TARDVALKMF ALLIALVLIQ SLVDYYQLRS VMFTSVEQRA
SMVADHLAMR SQLDGDFNVG EASQAVSREA LWHDDLLGVY LIDDTGNVLE GAETARIANT
PALFAHPEIR TAINASFILE RPQSFKASFD GIDGWVYVAA IPGTRLGSLT VVSLQSMQSE
LAAAALSSLV RRMLTTVILM GALFLVLHAA VIGPVQRLAT AVRNSVGGYF DPPSDIPKGE
LSDLALLFGQ VFGRLQHSLR DNEQLALVAN GTDAGVLIAD RTGQIVWANA GYLRMTGLER
EDIEGRLPRD ILVRHAGIGA LKILAESAAD GEGRNVEMIG LTKQGTQYWA SIEIRPVRDA
KGSIRNYIVV ENDVSRAKQT EIKLKRSQLE LQDRVLDLQH TSLQLEQERA KLTRTAQDLS
IAKEAAENAN RAKSAFLATM SHELRTPMNG VLGMADLLLS GPLTQEQRDG VTTIRESGEC
LLTILNDILD LSKLEAGRLE LEPEPTSPMT VLETVVEVLR PNAKEKGLVL TKSEEGHIPQ
RIMSDPTRLR QILFNLVGNA IKFTPQGEVS VSLAARACDD PDTAELVFTV RDTGIGIPEA
MLPRLFTRFQ QADSSISRTY GGTGLGLAIT RELTTLMNGT IEVESTEGKG SCFTVRLPVR
VLSEGKADTQ PAAAGQTPLP GTNAPLRVLL AEDQPVNQKL MCAVMERLGH QLTIAENGVE
VIRKLREQSF DIILMDIQMP LMDGIQTTKV IRAVDEPWND IPIVALTAHA MEGHCELYMA
AGMNGFVSKP FKIDVLVEEM ARALSEASMP PSPSRETEKA ASGEAKGSPA EDALEKMLEE
LERMAG
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