| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0647 |
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| Symbol | |
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| ID | 4709932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 726838 |
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| End bp | 729210 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639855109 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001002232 |
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| Protein GI | 121997445 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACGA TCATCGACTA CCCAACCATG GGCATCGCCC TGTGGATCGT CAGCCTCATC
GCCGCTGCGG TGATGGTCAT TGTCTGGCGA ATCAATCGCC ACGAGTCGGG CCCGGGGCTG
TGGGCCGGAA GTAGCGTCGT TCTGGCGGCC TGCTGGACCC CACTGTGGTT CACCGAGGGC
CTGGGCAGTG CAGTGGTCTT CATCAACAAC ACCGGTGCAT TCATCGCCGG CCTGCTCCTG
CTCGAAGGGG TCCTGCGGTT CAAGGGGATC GGCGATCAGC ACCGCAGACT GCCCTGGCAC
GGGCTGTACC TAGCGGTGGT GCTCAACCTC ATCTTCTTCG CTCTCGATCA CCATCAGCTG
CGCTACCTGA TCCTGGATGC CAACCTGTTT GGCGTGCTCG CACTCACCGC GTTCTTCCTG
GTCTGGCGCA GCTCCGAGGG GCTTGAACGT TTCATCTACG GCGCCACAGC GGTGGTCTTC
GTGATGATGG CAGCGGTCCT CGCCTACCGC TGGGGGCTAG CGGCAACGGG TGTTATCGGG
GTCGACGATC GGGTGAACCC GGCGACCGGA CCGATCATCC TCGCTAGCAT CCCCTGGACG
TTGGGTTGGA CCTACGGCCT GGCCATGGCC GCCAATTTGC GAGCGCAGCA GGAATCGGAG
CGGGCGCGGG CAGAAGCGGA GCGGGCCAAC CGCGCCAAGA GCGAGTTCCT GGCCAACATG
AACCACGAGA TCCGCACGCC GATGAATGCG GTGCTCGGCC GAACGCAGCT CCTGCTCGAC
ACCGACCTGG ACGCCCAACA GCTCGATCAC CTGGGAAAGA TCCACAATTC TTCCAAGATG
CTGCTCGGCA TCATCAACGA CATCCTCGAC ATCTCGAAGA TCGAGTCGGG CAAGCTGGAG
ATCGAGCCCC ACCGCTTCGA CCTTCGCGAA GTGATCGACC AGGTTGACAC ATTATTCTCG
GCCGCAGCCT CTGAGAAAGG GCTGGATGTG ACCTACGACA TTCAGCCGGA CCTACCGCGG
ATGCTGATCG GTGATTCGCT GCGCCTGACT CAGGTCCTGA GCAACCTGCT CAGCAACGCC
ATCAAGTTCA CGCCCCGCGG CGGCACCGTC GAACTGAACC TCCATGAGGT GGGGGAGGCA
GACGATGACG CCGCGCATGT CCGCTTCCAG GTCCGTGATA GCGGTATCGG CATGGATGCA
GAGCAGCTCA AACGGATCTT CCAGCCCTTT GAGCAGGCCG ACGCCTCGAC GACCCGCCAG
TATGGGGGCA CCGGTCTGGG GCTCGAGATC GGCCGCCGCC TGGTCACAAA CATGGGAGGA
CGCCTGGAGG TCACATCACG GCCCGGACAG GGCAGTCGCT TCTTCTTCAC CCTTCGGCTG
CCCATCGATG ATCCGGGGCA CTACGTCGGC GCCTACCACC CGAGTCCGCA CACCGGGTCC
GAGGAGCCGC AGGGCCGTGG GCCGGGATCG ATCGCGGCCC CGGTTTCGAA CCGAGGGTCC
TTGCCTGCCG AACCGAGCGA AGAGCGGGCC CATGACCAGA CCCTTTTCAG GGTGATCGCG
CCCGATCTAT CCGGCGCGCG GATCCTCCTG GTGGAGGACA ACCGGATCAA TCAGGAGGTT
GCCCTACAGC TGCTTGAGAA GACCGGGGCT CAGGTGCAGG CGGCGGAAAA CGGGCACGCG
GCCCTGGAAG CGGTCGATGC CCGGGAACCC GACCTCATCC TGATGGATCT GCAGATGCCG
GTGATGGACG GCTTCGAAAC CACCCGACGG CTGCTCGAGA CCGGCTATTC CGGACCGATC
ATCGCCCTGT CGGCGGCGGT CCTGGAAGAA GACCGCCACC GCGCCGAGGC CGCTGGGATG
CGTGGCTTGA TCAAAAAACC GATCCAGCAG GAGGTGCTCT ACGGCGCCCT GGCAGCCGAG
TTGAGGCCCT CCGCAGCGGT CCTGCGGCAG CCCGCCGAGC CCCGGGCGGC ATCGACGCAA
ACGCAGCCCG GCGCCGCCAC CGGTGCGAGC ACCCTGCCCG CCGATCTGCC CGGCTTTGAT
CTTGCACGCG GGCTTCAGAA ATTTGGCGGT GATGAACGCA ACTACGCCGA CATCCTGGCG
CTTTTCAAGA GCGAGCTGCC CGACTACCAC ACATCTCTCA TCCAGCCGCT GCGCAGCGGT
ACCGTCGCTG ATGGGGAGGA ACTGCGACGC ACCGCCCACA CTCTCAAAGG CGGCGCCGTA
AGTGTATGCG CCGAGGAGAT TGGTGCCCTG GCCGAGCAGA TCGAAAGCAC CCTGCGGCGG
GGCGAAGGAG TCGATGAGGC GCTGATCGAT GCGCTCGAGC AGGCCCTCCG GGACGCCGAC
CAAGCCCTCG AGGAAGTCGC TGCGGCTGCC TGA
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| Protein sequence | METIIDYPTM GIALWIVSLI AAAVMVIVWR INRHESGPGL WAGSSVVLAA CWTPLWFTEG
LGSAVVFINN TGAFIAGLLL LEGVLRFKGI GDQHRRLPWH GLYLAVVLNL IFFALDHHQL
RYLILDANLF GVLALTAFFL VWRSSEGLER FIYGATAVVF VMMAAVLAYR WGLAATGVIG
VDDRVNPATG PIILASIPWT LGWTYGLAMA ANLRAQQESE RARAEAERAN RAKSEFLANM
NHEIRTPMNA VLGRTQLLLD TDLDAQQLDH LGKIHNSSKM LLGIINDILD ISKIESGKLE
IEPHRFDLRE VIDQVDTLFS AAASEKGLDV TYDIQPDLPR MLIGDSLRLT QVLSNLLSNA
IKFTPRGGTV ELNLHEVGEA DDDAAHVRFQ VRDSGIGMDA EQLKRIFQPF EQADASTTRQ
YGGTGLGLEI GRRLVTNMGG RLEVTSRPGQ GSRFFFTLRL PIDDPGHYVG AYHPSPHTGS
EEPQGRGPGS IAAPVSNRGS LPAEPSEERA HDQTLFRVIA PDLSGARILL VEDNRINQEV
ALQLLEKTGA QVQAAENGHA ALEAVDAREP DLILMDLQMP VMDGFETTRR LLETGYSGPI
IALSAAVLEE DRHRAEAAGM RGLIKKPIQQ EVLYGALAAE LRPSAAVLRQ PAEPRAASTQ
TQPGAATGAS TLPADLPGFD LARGLQKFGG DERNYADILA LFKSELPDYH TSLIQPLRSG
TVADGEELRR TAHTLKGGAV SVCAEEIGAL AEQIESTLRR GEGVDEALID ALEQALRDAD
QALEEVAAAA
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