| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1052 |
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| Symbol | |
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| ID | 3624514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1282908 |
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| End bp | 1286048 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637699942 |
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| Product | sensory transduction histidine kinase |
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| Protein accession | YP_304600 |
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| Protein GI | 73668585 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTA GTCGAAAGAT TCTTGCTATT ATCTATATCA TCTTTGCTCT TCTCATTTCA
GTTGTTATTT TTGCGTCCCA GAGCATTCTC GGTTCCACTT TTTCCGATTT GCAAGAAAAA
GAGGTAACTG ACAACGTAGA AAAGGTAGAG AGCATGATTG AACTTCAGAT ACTACAGCTT
GAGAAGATTA ATTCTGTTCT CTCTTCAAGA GACGATGTCA GGAACTTAAT GCTTAATCAG
GATTTTCAAA ATCTCAGCAG TGGAACTTCA CTCGATGACA TCTTTTCCAT CAGTGGATGT
GATTTTATTT TTCTAGTAAA TAATTCAGGA TATATTGTGT ATTCTGATAT TTCGGATCCT
GAGCCCTCTA CTAATGCTTC CGCTCTTAAT GCTTCCATTC TTAATGTTTC CATTCTTAAT
GTTTCCACTC TTAATGCTTC CCCTCTTCCC AAAGTCCGTC AGAGAATTAA TGATGGCAGT
TTCCTCTGTA AGGGAGCTGA GACTTCTTTA AAAGGACTGT TCATGCTGAA AAATGATCCT
GCAATAATCT CCAGCCAGCC TGTGTCCGCT GCACCAGAGA GTAAAGAAAT CTCAGGTACA
ATCATTCTTG GCAAATATCT TGATTCGAGC TTTATCGAAT CCGTTCAGGA AAGTACAGGA
AGTACATTTA CACTTTACAG TTTTAACAAT GCATCCTCGG ATCTTCTGCA GGCTTTTTTT
GAGAACCCTG GTCCAAATTT CACATATACG GTAACTGGAG AACACACTAC TTGTTATTCC
GTGCTTGAGG ATCTTTCTGG AAGCCCAGCT ATTGTAATCA GGGCTGACGC AGGCAGCAAT
ATCTATGCCG AGGGCCAGGA AGCTCTCCGA TACATAGTGT TTTTCCTCCT GTTCGCAGGC
CTCATGATTG GGGCAAGTTG CAAGTTTCTT CTTGATAGGG AAGTTGTATC CCGAATAGTT
GCAATTGATA ATTTCGTAGA GAAAGTAGGA ATGAATGAAA ATTTTTCCGA ACGATATTTT
ATGGAGGGGG ATGATGAACT CTCAAGGCTT TCCAAGGGAA TAAATCAGAC TCTTGACCGC
CTGAGAACTA CTTCTAATGA ATTTAAAGCC CAGGAACACG AAAAAAAGCT AATCCTTGAT
TCTCTCAGTG AACTGGTAGT CTTTATGGAC TCCGAATTGA AGATAATCTG GCTAAATAAA
GCAGCTCTTG ATCACATGGG GATGAAAATT AATGACGTTA TCGGGCGTCA TTATCAAGAT
ATGTATATTT TATATAAAGA AAACCCGGGT AAATCTCCGG TACTGAAAGT ACTGGAATCC
GGAAACGAAG AGTTCGGGGA AGTAGTTACT CAGGACGGAA AGATCTGGAC GGTCACTGCG
ATTCCTATAA AAAATGAAGA CGGCAGGATT ACCGGGATCT TAAAAACAGG GCTTGATATT
ACCGCACACA GGCGTTCGGA AGAAAAACTA ATTCAGGCAA AACTTGAAGC TGAAGAAGCC
AACAATTCCA AGAGTGAATT TCTTGCAAAT GTGAGCCATG AGTTGCGAAC ACCTTTGAAT
TCCATTATAG GCTTTTCGGA TATTCTTATT GAGAAAGTTT TCGGAGAGCT TAACGAAAAG
CAGTTCCGAT ATGTAAACAA TATCTCAACC AGTGGGAAAC ATTTGCTGGT ACTTATAAAT
GATATCCTCG ATCTCTCAAA AGTAGAAGCC GGGAAAATGG AACTTCACTA CAGTGAATTT
TCTATTGATC CCGTTTTTGA AGAAGTCAAA GCCGTTCTCT TTCCTCTTAT ACAGGCAAAA
CCCCTTGAAG TAACTTTTAA CGTAGAACCC GACTTTACAA CGCTTGAAGC CGACAGAGGC
CGCCTAATTC AGATTCTTTA CAACCTTATA AGTAATGCAA TAAAATTTAC TCCAAATGGT
GGAAAAGTCT CGGTATATTG CAAAGAAAGC GGCAACCGAG CGCTTATTTC AGTCATAGAT
ACTGGTATAG GCATTTCTGC TGAAGACCAG GTAAAGCTTT TCCAACCCTT TACCCAGCTC
GATGCCTCAA CATCCAGGCA ATATTGCGGC ACAGGGCTTG GGCTTGCTCT TGTGAAGAAA
ATCGTGAACT TGCATCAGGG CGATATCTGG GTTGAGAGCG ATCCTGGGAA GGGCAGTAAC
TTTACCTTTG CACTTCCTCT CAGGAAACCT CTGGAGCGCA GGAAGGTCAG CGAGATTGGA
ATCGAAGATG TAACTATAGA ATTCGAGATG AATAAAGCAG AAGCCCTTTC AGTAAAAGAA
AATGCCGAAA ATTTGCAGGA AGAAGTAAAG CTGCCCGAAA TCTGTCATTC TGAAAAGGGA
GATGTTAAGC AGGAACTTAT TCTGGTAGTT GATGATGACA AAAGTTCCAG CGAACTTCAC
TCCACTATCC TTAAGGACGC AGGATACAGT GTGGCTATCC TTTATAGTGG AAAAAGAGTT
TTAGAGGTTG CAAAGAACCT GAAACCCGAT ATTATTACCC TGGACGTCTT CCTGCCAGGT
ACTAATGGCT GGCTTGTCTT GAGGCAACTA AAGAATGACC CTTACACGAC TTCTATACCT
GTACTTATTA TCTCCATGAC CAATAATAAC GAGCTTGGTA TTACCCTCGG AGCAACCTAC
TCCTTTGCAA AGCCGGTAAA CAGAATTGAA CTGGTAAACT CTCTCAGAGA AATTACCGGA
AAGTTCCGGT TCGAATATCC TAAAGTTCTT ATAGTAGATG ACGATGAAAA TACTGTAGAA
TTGTTGAGTT CGATGATTGA GCCTGAAGGC TTTGAGACTA TAAAAGCTTA CAGCGGGAGG
GAATGCCTGC AGAAGCTTTT TTTCTCAGAG CAACAGCCCG ATATTCTAAT TCTTGACCTC
ATGATGCCGG AGATTAGCGG ATTTGATATT ATATCCAGCA TGAGGGCCGA TGTACACACG
AAAGATATTC CTCTTATCGT ATGCACTTCT GGCGAGCTTA CTGAGAAGAA TCTCGAAGAA
TTGAACAGTG AGCTAGAAAG ACATCTTATT TCTATTCTGA AGAAAGGCAC TTTCGGAAGA
AAAGAGTTAA TTAATAGAAT AAAACAATTA GCTATGCTGA AGAGGCGTAA TGATGAAAAA
AATCCTGATT GTCGAAGATA A
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| Protein sequence | MNVSRKILAI IYIIFALLIS VVIFASQSIL GSTFSDLQEK EVTDNVEKVE SMIELQILQL
EKINSVLSSR DDVRNLMLNQ DFQNLSSGTS LDDIFSISGC DFIFLVNNSG YIVYSDISDP
EPSTNASALN ASILNVSILN VSTLNASPLP KVRQRINDGS FLCKGAETSL KGLFMLKNDP
AIISSQPVSA APESKEISGT IILGKYLDSS FIESVQESTG STFTLYSFNN ASSDLLQAFF
ENPGPNFTYT VTGEHTTCYS VLEDLSGSPA IVIRADAGSN IYAEGQEALR YIVFFLLFAG
LMIGASCKFL LDREVVSRIV AIDNFVEKVG MNENFSERYF MEGDDELSRL SKGINQTLDR
LRTTSNEFKA QEHEKKLILD SLSELVVFMD SELKIIWLNK AALDHMGMKI NDVIGRHYQD
MYILYKENPG KSPVLKVLES GNEEFGEVVT QDGKIWTVTA IPIKNEDGRI TGILKTGLDI
TAHRRSEEKL IQAKLEAEEA NNSKSEFLAN VSHELRTPLN SIIGFSDILI EKVFGELNEK
QFRYVNNIST SGKHLLVLIN DILDLSKVEA GKMELHYSEF SIDPVFEEVK AVLFPLIQAK
PLEVTFNVEP DFTTLEADRG RLIQILYNLI SNAIKFTPNG GKVSVYCKES GNRALISVID
TGIGISAEDQ VKLFQPFTQL DASTSRQYCG TGLGLALVKK IVNLHQGDIW VESDPGKGSN
FTFALPLRKP LERRKVSEIG IEDVTIEFEM NKAEALSVKE NAENLQEEVK LPEICHSEKG
DVKQELILVV DDDKSSSELH STILKDAGYS VAILYSGKRV LEVAKNLKPD IITLDVFLPG
TNGWLVLRQL KNDPYTTSIP VLIISMTNNN ELGITLGATY SFAKPVNRIE LVNSLREITG
KFRFEYPKVL IVDDDENTVE LLSSMIEPEG FETIKAYSGR ECLQKLFFSE QQPDILILDL
MMPEISGFDI ISSMRADVHT KDIPLIVCTS GELTEKNLEE LNSELERHLI SILKKGTFGR
KELINRIKQL AMLKRRNDEK NPDCRR
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