| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0659 |
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| Symbol | |
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| ID | 3834297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 781071 |
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| End bp | 783371 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637824743 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_425750 |
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| Protein GI | 83591998 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCGA ATGAGGATCT GATAGAGATC TTCGAAGACG AGGAAATTTC CCCCTCCTTG
ACGGCCAAGA CATGGCCGAT CCTCATCGTC GATGATGACC AGGATGTCCA TGATGTCTCG
CGGCTCGCTC TGCGTGGCGT GCGCCTGCTC GATTACGACC TGGAAACGCT TCACGCCTAT
AGCGCCGCGC AAGCCCGCGC TATCTTGTCC AGCCGCTCCG ACATCGCCGT CGCCCTGCTC
GATGTGGTGA TGGAGCGCGA GGACGCCGGC CTCGACCTTG TCCGCTGGAT CCGCTCCGAC
CCGGCGCGGG ATCTGCTGCG CATCGTCTTG CGCACCGGCC AGCCCGGTTA CGCCCCCGAG
GCCACGGTCA TCCAGGACTA TGACATCAAC GATTACCGCA CCAAATCCGA ACTCAATCGC
GGGCGGTTGA TCAGCATCCT GACCACCGCC TTGCGCTCCT ATCGCCAGAT GGCGGTGATC
GCCGCCAGCC GCGACGGCCT GGACAAGATC GTGCGCGCCT CGGCCGACCT GCTGGCCTCG
CCGTCGATGG CGATCTTCGC CGAAGGGGTG CTGACCCAGC TTGCCGGACT GCTGGGCACC
GAACGCTCGG GGATCGTTCT CGCCCGCCGG AATCGCCGTC CCGGAGCCAC CGCGTCGATG
GCGATGACCG GCGACGAGGG GTTCGTCCTT GCCGCCGCCG GACCGCTGAG CGCCGATATC
GGCCGGCCGC TGTCCGATAT CGGCGACCAC CAGACCGCCG AAATCCTGCG CCGCACCCTG
GAAAGCCGAC GCTCGTCCTT CGATCACGGC TCCATGGCGC TCTATATCGC CACGCCCAAC
GGCGATTCCC TGGCCGTGCT GATGGAGGTG GCGAAAACGC TGGGCGATAC GGACCGCAAG
CTGGTCGAGG TGTTCTGCGT CAACATGGCC GCCGGCTTCG ACACCATCAG CCTGTTCGAG
CAGATCAGCC TTCAGGCGTT CCACGACGAG GCGACGGGGC TGCCCAATCT GGCGGCCTGC
CAGAGCCTGA TCGACCAATA CCTGCAGCGG CGCCAGCCGG TGGCCGTGAC CTTTTTTTCC
CTTGAGGGCT TTTCGGCGAT CAGCGATACC CTGGGGCGGG TGATCGGCGA TCGCATGATC
GGCCTGCTGG CCAATGCCTT CCGCCACCGC TTGCAAGAGC GCGGCGAGGT GTTCCGCGTC
GGACAGGAAA CCCTGGCCAC GGTGATCGGC GGCCCCGTCG ATCAGGTTGG ACCTTTGGCC
GACCAACTGG CGGGCGATTT CCGCGCGGGT TTGCCGCTTG ACTCGATGAC CCTGCCGGTC
TCGTTCTCCC ATGGCACCTC GGTCTCGACC TCCGAACACG ACACCGCGCA AATCCTGGTC
CAGCGCGCCG GCATCGCCAT GCAAAAGGCC CGCAACATCA AGCGCGGCGG CGGGCTGACC
TATGCGGTGG CGATGGAGGA GGAAATCCGC GCCCATATCG GCGTCATCTC AAAGCTGGGC
GCGGGCGTCG TCTCGGAGGC CTTCGTCGCC GTCTTCCAAC CCAAGATCCG CTTGGCCGAT
CGCAGTTGCC ACGGCGGCGA GGCCCTGGTC CGCTGGCGCG ATGGCGATGG CACGATGATC
GCGCCGTCGC TGTTCATCCC GGCGGCGGAA ACCTCGGGCC ATATCGTCGA TATCGGCTAT
TCGGTCTTCC GCCAAAGCTG CGCCATGATC CGCTCGCTGA AGGTTTCGCA AGATGACGCG
CGGATCGCCG TCAATCTGTC GGTCCGCCAG ATGCGCGAAC CCGATCTGAT CGACAAGCTG
GTTTCCATCG CCGCCGAGGA AGGCGTGGCG ACGACCCGGC TCAAACTGGA AATCACCGAA
AGCATCGTCA TCGACGACCT AACGCATACC GTATCGCTTC TCAAAGCCCT AAAGGATAAG
GGATTTCTGC TGGCCCTGGA TGATTTCGGC ACGGGCTATT CCTCGCTCAG CTATCTGCGC
AGCCTGCCCA TCGACACCTT GAAGATCGAC CGCAGCTTCG TCTCGGGCCT CGCCGAACAG
GCCGATATGC GCAAGATCGT CGGCTTGATC ATCGGCCTTG GCCATGAGCT TGGCTTCGAC
ATCACCGCCG AGGGCGTGGA AACCGAGGAG GAGGCGCGGA TCGTCACCGA AATGGGCTGT
TTCACCGCCC AGGGCTATTT GTTTTCCAAG CCCTTGAGCG CCGAGGATTT CCTGGTCTTC
GCCCGCACCC ACGCCGGGGC CCGTCAAACC TCGGGCGGGT CGCTCTCGGC GGAGGGCTGT
ATCAGGGCCC GGGACGCCTG A
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| Protein sequence | MTPNEDLIEI FEDEEISPSL TAKTWPILIV DDDQDVHDVS RLALRGVRLL DYDLETLHAY
SAAQARAILS SRSDIAVALL DVVMEREDAG LDLVRWIRSD PARDLLRIVL RTGQPGYAPE
ATVIQDYDIN DYRTKSELNR GRLISILTTA LRSYRQMAVI AASRDGLDKI VRASADLLAS
PSMAIFAEGV LTQLAGLLGT ERSGIVLARR NRRPGATASM AMTGDEGFVL AAAGPLSADI
GRPLSDIGDH QTAEILRRTL ESRRSSFDHG SMALYIATPN GDSLAVLMEV AKTLGDTDRK
LVEVFCVNMA AGFDTISLFE QISLQAFHDE ATGLPNLAAC QSLIDQYLQR RQPVAVTFFS
LEGFSAISDT LGRVIGDRMI GLLANAFRHR LQERGEVFRV GQETLATVIG GPVDQVGPLA
DQLAGDFRAG LPLDSMTLPV SFSHGTSVST SEHDTAQILV QRAGIAMQKA RNIKRGGGLT
YAVAMEEEIR AHIGVISKLG AGVVSEAFVA VFQPKIRLAD RSCHGGEALV RWRDGDGTMI
APSLFIPAAE TSGHIVDIGY SVFRQSCAMI RSLKVSQDDA RIAVNLSVRQ MREPDLIDKL
VSIAAEEGVA TTRLKLEITE SIVIDDLTHT VSLLKALKDK GFLLALDDFG TGYSSLSYLR
SLPIDTLKID RSFVSGLAEQ ADMRKIVGLI IGLGHELGFD ITAEGVETEE EARIVTEMGC
FTAQGYLFSK PLSAEDFLVF ARTHAGARQT SGGSLSAEGC IRARDA
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