| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1005 |
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| Symbol | |
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| ID | 3679917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1214166 |
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| End bp | 1216106 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716340 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_321524 |
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| Protein GI | 75907228 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.442988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000217029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCACAAC CGCTAACCGT TTTAATTATT GATGATTGTG CTGAAGATCG CCAAGTTTAT
CGCCGCTATC TCCAGCAAGA CCAAGAGCAT CACTATACAA TTCTGGAACA AGAATCAGGA
GAGGAGGCAC TGGAATTATG TCGGCAGTTG CAACCTGATG TAATTTTATT AGACTTTTTA
CTGCCAGACC AAGATGGACT AGAACTTCTG GCTGAATTAC AAAAGCTGCT GCAAGGAAGT
ATGCCAGCTA TAGTCATGTT AACGGGTTAC GGTAATGAAG CGATCGCCGT ACAAGCAATG
AAAAGTGGTG TTCATGACTA TTTAGTGAAA GAACAAACGA CAGCAGAACG TTTGCGTTCC
ACTCTTCACT CTGCAATTAT CCAAACGCGA TTACGCCAAG AACTTTCCCG GAGTCAGGAG
CAATTACACG ACAGCCAAAA ATTTATTGAA CGCATTGCAG AAACCACTCC GGGGATTTTG
TACGTTCACG ATTTAGTCGA AAAGCGGAAT GTTTATATCA ATGGTAAGGT TGGTAATTTA
TTAGGTCATA CTCCCCAAAC AATTCAAAAT TTGGGAAAAG AATTTCTCAT CACATTCATG
CACCCTGAGG ATTTAGTTCG GCTTCCGCAA GTATTTCAGC AGTTTGACTC AGCCAAAGAT
GGAGACATCA TCGAACATGA GTATAGGATG CGACACGCTG ATGGTGGATG GTGTTGGTTT
TTTAGTCGTA ATTCTGTGTT CATGAGAAAC AGTGATGGTT CACCACGCCA AATAGTCGGT
ACAGCCTTTG ATATCACCGC TCGTAAGCAA GCTGAAGAAG AACTACGCTC TAGCAATGAA
CGTTTCCGAC TAGCTGCCGC CGCCGTGAAT TCTCTCATTT ATGAATGGGA TATAAAAAAA
GGTACGGTCA CTAGGACGGA GGGATTGACC CGGATTTTAG GCTACTCTGT GGAGGAAGCC
ACCCCAAATA TTGAATGGTG GCAAGAGCAA ATTCATCCTG ACGACCAGGA CTTTTTGGTT
GAGCAATTCC AAAATCCACC TGTTAATCAA ACTCATTATA CTTTTGAATA TCGCATCCGA
CACAAAAACA ATCAGTATTT ATACGTATTA GATCAAGGGA TAATCACCAG AGATGAAAAT
GGCCAGCCAG TGCGAGTAGT CGGTAGTGCA ACCGATATTA GCGATCGCAA ACTTGCGGAA
GCAGAACGCG ACCAACTATT GCAATTAGAA AAATTAGCCC GTGCGGAAGC AGAAGCCGCC
AATCAAACGA AAGATGAGTT TGTGGCGATG GTATCTCATG ATTTGCGATC GCCATTGAAT
GCAATTCTCG GCTGGTCACA ATTGTTACGA ACTCGCCAGC TTGATGAAAG CACATTTACC
CGTGCGTTAG AAACCATTGA ACGCAACGCA CAATCACAGT CAAAACTTTT GGAGGACTTA
CTGGATATGT CTCGTATCCT CAGGGGTAAG TTACAGTTGG AGTTTTGCCT AGTGGAGTTA
CCTGCTATTA TCGGCGTAGC AATTGAGACT GCTTATCCCT CAGCCAAAGC TAAAGATATT
CATTTAAAGT CGGTGATAGA TGAATCAATT CCACTGATTC CTGGTGATAT CAATCGCTTG
TTACAAGTTT TAGGCAATCT GCTTTCAAAT GCGATTAAAT TCACACCTCC AGAAGGACAG
ATCACAGTCC AACTATCATA TACAGACTCT GAAGCTCACA TCACAGTGAT TGATACAGGT
ATTGGGATTA AGTCAGAATT TTTACCCTAC GTTTTTGAGC GCTACCGTCA AGCGGACTGC
CAACATAAAC AACATGGTTT GGGTTTAGGG TTAGCGATCG CCCGTTATCT CATAGAATTA
CACGGCGGGG CGATTCATGT GAATAGCCTG GGTGAGGGAC AAGGAACTAC TTTCACTATT
AAATTACCAT TGCACCAATA A
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| Protein sequence | MAQPLTVLII DDCAEDRQVY RRYLQQDQEH HYTILEQESG EEALELCRQL QPDVILLDFL
LPDQDGLELL AELQKLLQGS MPAIVMLTGY GNEAIAVQAM KSGVHDYLVK EQTTAERLRS
TLHSAIIQTR LRQELSRSQE QLHDSQKFIE RIAETTPGIL YVHDLVEKRN VYINGKVGNL
LGHTPQTIQN LGKEFLITFM HPEDLVRLPQ VFQQFDSAKD GDIIEHEYRM RHADGGWCWF
FSRNSVFMRN SDGSPRQIVG TAFDITARKQ AEEELRSSNE RFRLAAAAVN SLIYEWDIKK
GTVTRTEGLT RILGYSVEEA TPNIEWWQEQ IHPDDQDFLV EQFQNPPVNQ THYTFEYRIR
HKNNQYLYVL DQGIITRDEN GQPVRVVGSA TDISDRKLAE AERDQLLQLE KLARAEAEAA
NQTKDEFVAM VSHDLRSPLN AILGWSQLLR TRQLDESTFT RALETIERNA QSQSKLLEDL
LDMSRILRGK LQLEFCLVEL PAIIGVAIET AYPSAKAKDI HLKSVIDESI PLIPGDINRL
LQVLGNLLSN AIKFTPPEGQ ITVQLSYTDS EAHITVIDTG IGIKSEFLPY VFERYRQADC
QHKQHGLGLG LAIARYLIEL HGGAIHVNSL GEGQGTTFTI KLPLHQ
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