| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2925 |
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| Symbol | |
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| ID | 4669349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3214272 |
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| End bp | 3216503 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824125 |
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| Product | diguanylate cyclase/phosphodiesterase / diguanylate cyclase |
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| Protein accession | YP_971267 |
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| Protein GI | 120611589 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.249336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCC CCGTCGCCGA GCCCGAATGC CAGCCCGCCG CCGCGCCGTG CGCGGACCCG
GCGTGGCAGG TACTGGTGGT GGACGGCGAT CCTGGCGTGC ACGGCGTGGT GCAGGACACG
CTGGAAGGCG TGGAACTGCT GGGCCGCCCC CTGGGCTGCC TCCATGCGTA CACCCGTTCG
CAGGCGCGTG CCATGCTGCT GGGCGCATCC GGCATCGCGG TGGTGCTGCT CGGCGCTGCT
GAGGACGGAG ACGCCGGCGA TGCCGAAATG CTGGATTTCA TCCGCCACAC CGCCGGCCTG
GGCAATACCC GTATCGTGCT GTGTACCGCG CAGGCGGGCC ATGCGCCGGA CGAGGACACG
CTGCTGCGCT ACGACATCAA CGATTTCCGC GCGAAATCCG AATGGGCGCA GGGGCGGCTA
TTGCCCGTGG TCCTCTCCGC CATCCGCTCC TACGAACAGC GCTGCTCCAT CGACGCCAGC
CGCCGCAGCC TCGAACTCAT CGTGCGTTCC AGCGCGGCGC TGCTGGAGGA GCCCGATCTG
CAGGCTTTCG CAACCGGCGT ACTGACCCAG CTCGGCGCCT TGCTGGACGG CGGGGCGCGG
GGCATGGCAT GTATGCTGCA CGGTGCCGCA GCCGACAGCT GCCGGGTAGT GGCGGCGACG
GGCCGGTTCG CCGGATGCAT CGGCCGGGAT ATCGATGCGC TGCCCGACGT CCGCTGCCGG
CAATTGCTGG CCCGGGCGCT CAAGTTCAGC CACAACGTCC ATGGGGAAGA GGGCGGCATC
GCGCTGTACT TCGGCAACCG GAGCGAGCGC GGCATGGCCG TCTTCGTGGA CACGCCGCAT
CCCCACAACG CACTGGATCG CCAACTGCTG GATGTCTTTT CCATCAACAT GCGGACCCTG
CTGCTCAACC GGGACCTGCT GGACCGGCTG CGCCGCTTCG CCTACTACGA CCCGCTGGTC
CGCCTGCCCA ACCGCGCGCA TTTCGTCGAG AAGGTGGACG ACTGCGTGCG GCGCGGCGGC
GCGCAGGACC ATGTCCTGGC GCTGATCGAC ATCGACGACT TCAGCGCGGC GAACGACGTG
ATGGGCCATG CCTTCGGCGA CCGGCTGCTG GAGGCCGTGG CCCGCCGCCT GGCCGACGCG
CTGCCCTCCG GCGTGCTGCT GGCGCGCGTG GGCTCGGACA CCTTCGGCGT GCTCGGCGAA
GCCCGCCAGG TGGCGTTGCC GCAATTGCTG CAGTGCGTGC GGCCGCCGCC GGTCGTGGAC
GGCGTGCCGC AGAAAGTGTC GCTCACCTGC GGCTACGTCC ACTTGCCCTC GGATGCCCAG
AAGGGCGCGG ACCTCGTCAA GGATGCGACC ATCGCCCTCA AGCGGGCCAA ACGGGACCAC
CGCGGCCAGC ACCTGCAGTA CCTCGAACAC ATGGGCCGGG AGGCCCGCGA CCGCGCGATG
CTGCTGTCCG ACCTGCGCGC GGCGATCGAC GATGCCCAGC TGTTCCTGGT CTATCAGCCG
CAACTGCATC TGGGCACCGG CGCCCTCGTG GGCATGGAGG CCCTGCTGCG CTGGCGCCTG
CCCGACGGGC GGTTCGTCTC CCCGGATGAC TTCATTCCGA TCGCGGAGCA CTCGGGCCTC
ATCGCGCCGC TCGGACAATG GGTGCTCTCC ACGGCCTGCC AGACCCTGTG TGCCCTGGCC
CGCGAAGGCC TGGCGCCGCC GCGCATTTCC GTGAACGTGT CGGTGGTCCA GTTGCAGGAT
CCCGCGTTCC CGGATGCGGT GCGGGCGGCG CTGGCGGCCA GCGGTCTGCG CGGCAGCCAG
CTGGAGCTGG AAATCACGGA GTCCGTCGCT GTGGTGCCCA CCCAGTTGCT GCAGTCCACG
CTGGCCTCGC TGCGCGCCGA CGGCGTCAGC ATCGCCATCG ACGACTTCGG CACCGGCTAC
TCGTCCCTGA GCTACCTGGA GCGCCTGCCC CTGGACCGCA TCAAGATCGA CCGCAGCTTC
GTGCGCCGCC CCACCGGAGC GCAGGGCGCG CGCATCGCCG AGATGATCCT GAGGCTCGGG
CACCAGTTGG GCCTGCGCGT GATGGCCGAG GGCATCGAGG ACGCCGCCAC GTGGGACGCG
CTGCTGCGCA TGGGATGCGA CGAAGGGCAG GGCTACCATA TCGCCGTACC CATGGACCTG
CGGCAGCTGC GGGCCTGGCT GGCGGCACGG CCCGCCGCGC AGCGTCAGTT CGGGCGCAAT
GGCGGCAGGT AG
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| Protein sequence | MDGPVAEPEC QPAAAPCADP AWQVLVVDGD PGVHGVVQDT LEGVELLGRP LGCLHAYTRS
QARAMLLGAS GIAVVLLGAA EDGDAGDAEM LDFIRHTAGL GNTRIVLCTA QAGHAPDEDT
LLRYDINDFR AKSEWAQGRL LPVVLSAIRS YEQRCSIDAS RRSLELIVRS SAALLEEPDL
QAFATGVLTQ LGALLDGGAR GMACMLHGAA ADSCRVVAAT GRFAGCIGRD IDALPDVRCR
QLLARALKFS HNVHGEEGGI ALYFGNRSER GMAVFVDTPH PHNALDRQLL DVFSINMRTL
LLNRDLLDRL RRFAYYDPLV RLPNRAHFVE KVDDCVRRGG AQDHVLALID IDDFSAANDV
MGHAFGDRLL EAVARRLADA LPSGVLLARV GSDTFGVLGE ARQVALPQLL QCVRPPPVVD
GVPQKVSLTC GYVHLPSDAQ KGADLVKDAT IALKRAKRDH RGQHLQYLEH MGREARDRAM
LLSDLRAAID DAQLFLVYQP QLHLGTGALV GMEALLRWRL PDGRFVSPDD FIPIAEHSGL
IAPLGQWVLS TACQTLCALA REGLAPPRIS VNVSVVQLQD PAFPDAVRAA LAASGLRGSQ
LELEITESVA VVPTQLLQST LASLRADGVS IAIDDFGTGY SSLSYLERLP LDRIKIDRSF
VRRPTGAQGA RIAEMILRLG HQLGLRVMAE GIEDAATWDA LLRMGCDEGQ GYHIAVPMDL
RQLRAWLAAR PAAQRQFGRN GGR
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