| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0868 |
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| Symbol | |
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| ID | 4477079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1012082 |
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| End bp | 1014313 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725404 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_868512 |
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| Protein GI | 117919320 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAGTC AATCGCAAGA AATTGTTTTT TTAGATGAGC CCATAGCAAG CACAGCGGTA
AAGGCTGCTA AAGCAGTCAA AATACTCACA GTTGATGATG ATATTAACTT CCAACGCTCT
ACCGCATTTG CACTGTCTAC CCTGACCATT CTTGGCTCAA AAATAGAATT AACCCAAGCA
TTTAGCTACG CAGAAGCCTG CCAAATCGTC GCCAATGAAG ACGATTTTGC CATTGCCTTA
GTCGATGTGG TGATGGAGAC CGAAGACGCA GGGCTGAGAT TAGTTCGCGG CATTCGAGAA
GTCCTCGGCA ACGAGAAAAT TCGCATTATT CTGCTCACCG GACAACCCGG CATGGCACCA
GTTTTTAACG TGATGCGCGA CTATGATATC AACGATTATT GGACTAAGTC GGAACTCTCC
GCCGACCGCC TACAAACCAT ACTGACCACC AACCTGCGCT CATATCAACA GATCAGCAAT
ATCGCCAACG CAAAACGCGG GCTGCAATTA ATCGCCGAGT CCAGCGGCGC CCTCTATACC
TCGCGCAATA TCAAAGAACT CTCGAGCAAG ATGCTACAGC AACTGGCCAT ACTGCTGAAT
TTGCCTTCAG GCGGGATTGT CTGTGTCAAA GCCATTAATG ATCTCAGCGA GTTTGGTCAT
ATACATCAGA TCATTGGTGC CTCAGGGGAA TTTGAGTCTT ACTATGGCAA AGCCTTGCAA
GAGCTCGAGC AGCAACATAT TCGCATCCAG CTCGAATTAT CGCTCAGCAG TAAACAATCA
CGCATCGAGC CACAATACAC TTGTCTGTTT TTCCCCGGCG AGCTGGCTGG CAATGACTAT
GCGGTTTACC TCGCCACGGG GCGACTCTTA GATGCGACCG AAACCGAGCT AATTCGCGTC
TTTAGCATGA ATATTTGCGG CGGCTTACAC AGTGTCTCCT TGATGAGTCA ATTGGATAAG
ATCGCCTTCG AAGATCCTTT ACTTAAGATC CCGAATCGCA ATGTACTCAT TCGCACACTC
GATGGCATTT TAAAGGAAGA TGTTCGCGAT AAATTTAATC TATTACTCAT TGATATTGAT
AAGTTTTCAG ACTTTAACCA TGTGTTTGGC TCTGAGCATG GCAACGATAT GCTCAAGCAT
GTGGCCAATA GTCTGAGGGA GCAGTTCGAT GCGAGCGTGC TCGTCAGCCG CTTAAAGGAT
GATAAGTTCG CCATTTTAGG CCCGAAGCAC TTAGTCACCG CCGCACTGAT TGAGCAGCTG
TTTGTCGCCC CCTATCAACA GGGTACCTCC TGCATTACCG TCAATATCAG CACTGTGACT
CTCCCCCTTG AGCTCGCCGA AGGGGATGCG GTCGCCGCCA TCACTCAGCT GAATATGGCG
CTCAAAAAGG CCAAGAGTCT GGGCATTCGT CAGCATGTGA CCTATCAGCC CAACAACGAT
GATGTGACGT CACATTTTGA ATTACTACAG GCACTGCAGT TAGGCATTAC CCAAGGGGAT
ATTCATATTG CTCTGCAGCC ACAGGTGTCG TTACAAACGG GAGAAGTCGT TGGGGTCGAA
GCGCTGGCGC GCTGGACTTT ACCCAATGGT GATAAGGTGC CGCCCCTACG TTTTATCCCC
ATCGCCGAAG CGACGGGGCT GATCACTCAG TTGGGGGAAC AACTGTTTGT GCAATCATGC
CAAGCCATGC ATGCTCTCGC CGAGGCGGGT TATCAAAACT TACGTATTGG CGTTAACCTC
TCCGCAATGC AATTTGAGCA GGAAAAAATC GTTAATCAAC TGCATAGCCA TATTGAGGCC
GCGCAGATTG CCAGCAAACA TATCGAAATC GAAGTCACAG AATCCATTGC CATGCAGAAT
TTTGAGGTGA TCAACAAACA GCTTAAGGCA CTGCGCAATA TGAATATCAA GGTCGCGATC
GATGACTTTG GTACTGGGTT TTCTTCCCTT GCCTACCTTA GCAAGCTGAC CTTTGACAGG
ATTAAGATTG ATAAATCCTT TATCGATAAT ATCACCACCG ACGATGGCGC CGCGGCGATT
GTCGACAGCA TTATTCTCCT CGGTGAACGC TTCAAGATGA ATGTGATTGC CGAAGGCGTT
GAAACCCGCG AGCAAGCCCG CTGGCTTAAA GACCGCGGCT GCCATGATGC CCAAGGCTAT
TTTTACGCTA AACCAATGCC GCTCCAAGAG TTATTAGTGT GGCTCGCCAA TTATCAAAAA
AGCATTCTGT GA
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| Protein sequence | MVSQSQEIVF LDEPIASTAV KAAKAVKILT VDDDINFQRS TAFALSTLTI LGSKIELTQA
FSYAEACQIV ANEDDFAIAL VDVVMETEDA GLRLVRGIRE VLGNEKIRII LLTGQPGMAP
VFNVMRDYDI NDYWTKSELS ADRLQTILTT NLRSYQQISN IANAKRGLQL IAESSGALYT
SRNIKELSSK MLQQLAILLN LPSGGIVCVK AINDLSEFGH IHQIIGASGE FESYYGKALQ
ELEQQHIRIQ LELSLSSKQS RIEPQYTCLF FPGELAGNDY AVYLATGRLL DATETELIRV
FSMNICGGLH SVSLMSQLDK IAFEDPLLKI PNRNVLIRTL DGILKEDVRD KFNLLLIDID
KFSDFNHVFG SEHGNDMLKH VANSLREQFD ASVLVSRLKD DKFAILGPKH LVTAALIEQL
FVAPYQQGTS CITVNISTVT LPLELAEGDA VAAITQLNMA LKKAKSLGIR QHVTYQPNND
DVTSHFELLQ ALQLGITQGD IHIALQPQVS LQTGEVVGVE ALARWTLPNG DKVPPLRFIP
IAEATGLITQ LGEQLFVQSC QAMHALAEAG YQNLRIGVNL SAMQFEQEKI VNQLHSHIEA
AQIASKHIEI EVTESIAMQN FEVINKQLKA LRNMNIKVAI DDFGTGFSSL AYLSKLTFDR
IKIDKSFIDN ITTDDGAAAI VDSIILLGER FKMNVIAEGV ETREQARWLK DRGCHDAQGY
FYAKPMPLQE LLVWLANYQK SIL
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